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Report for CCDS86473.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86473.1 Public Homo sapiens 15 HIGD2B 24 110 108 CCDS HistoryNCBI Gene:123346Re-query CCDS DB by CCDS ID:86473.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86473.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311755.6 ENSP00000307951.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000311755.6Link to Ensembl Protein Viewer:ENSP00000307951.3Re-query CCDS DB by Nucleotide ID:ENST00000311755Re-query CCDS DB by Protein ID:ENSP00000307951
Original member Current member NCBI NM_001350932.3 NP_001337861.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001350932.3Link to Protein Sequence:NP_001337861.1Re-query CCDS DB by Nucleotide ID:NM_001350932Re-query CCDS DB by Protein ID:NP_001337861Link to BLAST:NP_001337861.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001337861.1 106 Q4VC39 106 100% 0 0

Chromosomal Locations for CCDS 86473.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 72676054 72676374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (321 nt):
ATGGCGACTCTCGGCTTTGTGACTCCGGAGGCCCCCTTTGAATCATCGAAGCCCCCCATCTTTGAGGGGC
TTAGCCCCACTGTTTACAGCAATCCAGAGGGTTTCAAGGAAAAGTTCCTTCGCAAGACCCGCGAGAATCC
GGTGGTACCCATAGGTTTCCTGTGCACGGCGGCCGTCCTCACCAACGGCCTCTACTGCTTCCACCAGGGC
AACAGCCAATGTTCACGGCTTATGATGCACACCCAGATCGCCGCCCAGGGCTTCACCATTGCAGCCATCT
TGCTGGGTCTAGCTGCCACCGCTATGAAGTCTCCACCCTGA

Translation (106 aa):
MATLGFVTPEAPFESSKPPIFEGLSPTVYSNPEGFKEKFLRKTRENPVVPIGFLCTAAVLTNGLYCFHQG
NSQCSRLMMHTQIAAQGFTIAAILLGLAATAMKSPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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