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Report for CCDS3819.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3819.1 Public Homo sapiens 4 HAND2 24 110 108 CCDS HistoryNCBI Gene:9464Re-query CCDS DB by CCDS ID:3819.1Re-query CCDS DB by GeneID:9464See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3819.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359562.4 ENSP00000352565.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000359562.4Link to Ensembl Protein Viewer:ENSP00000352565.4Re-query CCDS DB by Nucleotide ID:ENST00000359562Re-query CCDS DB by Protein ID:ENSP00000352565
Original member Current member NCBI NM_021973.3 NP_068808.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021973.3Link to Protein Sequence:NP_068808.1Re-query CCDS DB by Nucleotide ID:NM_021973Re-query CCDS DB by Protein ID:NP_068808Link to BLAST:NP_068808.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_068808.1 217 P61296-1 217 100% 0 0

Chromosomal Locations for CCDS 3819.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 173527277 173527375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 173528735 173529289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (654 nt):
ATGAGTCTGGTAGGTGGTTTTCCCCACCACCCGGTGGTGCACCACGAGGGCTACCCGTTTGCCGCCGCCG
CC
GCCGCAGCTGCCGCCGCCGCCGCCAGCCGCTGCAGCCATGAGGAGAACCCCTACTTCCATGGCTGGCT
C
ATCGGCCACCCCGAGATGTCGCCCCCCGACTACAGCATGGCCCTGTCCTACAGCCCCGAGTATGCCAGC
GGC
GCCGCCGGCCTGGACCACTCCCATTACGGGGGGGTGCCGCCGGGCGCCGGGCCCCCGGGCCTGGGGG
GG
CCGCGCCCGGTGAAGCGCCGAGGCACCGCCAACCGCAAGGAGCGGCGCAGGACTCAGAGCATCAACAG
C
GCCTTCGCCGAACTGCGCGAGTGCATCCCCAACGTACCCGCCGACACCAAACTCTCCAAAATCAAGACC
CTG
CGCCTGGCCACCAGCTACATCGCCTACCTCATGGACCTGCTGGCCAAGGACGACCAGAATGGCGAGG
CG
GAGGCCTTCAAGGCAGAGATCAAGAAGACCGACGTGAAAGAGGAGAAGAGGAAGAAGGAGCTGAACGA
A
ATCTTGAAAAGCACAGTGAGCAGCAACGACAAGAAAACCAAAGGCCGGACGGGCTGGCCGCAGCACGTC
TGG
GCCCTGGAGCTCAAGCAGTGA


Translation (217 aa):
MSLVGGFPHHPVVHHEGYPFAAAAAAAAAAAASRCSHEENPYFHGWLIGHPEMSPPDYSMALSYSPEYAS
G
AAGLDHSHYGGVPPGAGPPGLGGPRPVKRRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKT
L
RLATSYIAYLMDLLAKDDQNGEAEAFKAEIKKTDVKEEKRKKEL
NEILKSTVSSNDKKTKGRTGWPQHV
W
ALELKQ




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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