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Report for CCDS12539.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12539.1 Public Homo sapiens 19 EID2B 24 110 108 CCDS HistoryNCBI Gene:126272Re-query CCDS DB by CCDS ID:12539.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12539.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000326282.5 ENSP00000317564.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000326282.5Link to Ensembl Protein Viewer:ENSP00000317564.4Re-query CCDS DB by Nucleotide ID:ENST00000326282Re-query CCDS DB by Protein ID:ENSP00000317564
Original member Current member NCBI NM_152361.3 NP_689574.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152361.3Link to Protein Sequence:NP_689574.1Re-query CCDS DB by Nucleotide ID:NM_152361Re-query CCDS DB by Protein ID:NP_689574Link to BLAST:NP_689574.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689574.1 161 Q96D98 161 100% 0 0

Chromosomal Locations for CCDS 12539.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 39532317 39532802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (486 nt):
ATGGCGGAGCCGACTGGGCTGTTGGAGATGTCCGAGCTCCCCGGAGATAGCAGTGTCCCACAGGTGGGCA
CCGCGAGTGGCGTCAGCGACGTACTGCGGGGGGCAGTCGGCGGCGGGGTTCGGGTGCAGGAGGCTCGGGA
AGGCCCAGTGGCCGAAGCTGCGCGGTCCATGGCGCGGATGCCGGGCCCTGTGCCCGGGCCCATCCCCAGC
AGCGTCCCGGGCCTGGCCTCCGCGCCAGACCCCCATCAGCAGCTCGCTTTCTTAGAAATTAACCGGCAGC
TGTTGTTCCGCGAGTATCTGGATGGTAGCTCCATGATTCCGGTCAGATTACTACGGGATTTCGAGGAACG
CCGCAGGCTGTTTGTGGAAGGCTGCAAGGCGAGGGAAGCAGCCTTTGACGCGGATCCCCCGCAGATGGAC
TTCGCTGCTGTCGCGTTTACGGTAGCGCTGACTGCCTCCGAGGCCCTCAGTCCTCTGGCCGACTGA

Translation (161 aa):
MAEPTGLLEMSELPGDSSVPQVGTASGVSDVLRGAVGGGVRVQEAREGPVAEAARSMARMPGPVPGPIPS
SVPGLASAPDPHQQLAFLEINRQLLFREYLDGSSMIPVRLLRDFEERRRLFVEGCKAREAAFDADPPQMD
FAAVAFTVALTASEALSPLAD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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