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Report for CCDS12475.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12475.1 Public Homo sapiens 19 HSPB6 24 110 108 CCDS HistoryNCBI Gene:126393Re-query CCDS DB by CCDS ID:12475.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12475.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000004982.6 ENSP00000004982.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000004982.6Link to Ensembl Protein Viewer:ENSP00000004982.3Re-query CCDS DB by Nucleotide ID:ENST00000004982Re-query CCDS DB by Protein ID:ENSP00000004982
Original member Current member NCBI NM_144617.3 NP_653218.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144617.3Link to Protein Sequence:NP_653218.1Re-query CCDS DB by Nucleotide ID:NM_144617Re-query CCDS DB by Protein ID:NP_653218Link to BLAST:NP_653218.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653218.1 160 O14558 160 100% 0 0

Chromosomal Locations for CCDS 12475.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 35755522 35755683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35755772 35755894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35756811 35757008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (483 nt):
ATGGAGATCCCTGTGCCTGTGCAGCCGTCTTGGCTGCGCCGCGCCTCGGCCCCGTTGCCCGGACTTTCGG
CGCCCGGACGCCTCTTTGACCAGCGCTTCGGCGAGGGGCTGCTGGAGGCCGAGCTGGCTGCGCTCTGCCC
CACCACGCTCGCCCCCTACTACCTGCGCGCACCCAGCGTGGCGCTGCCCGTCGCCCAGGTGCCGACGGAC
CCCGGCCACTTTTCGGTGCTGCTAGACGTGAAGCACTTCTCGCCGGAGGAAATTGCTGTCAAGGTGGTGG
GCGAACACGTGGAGGTGCACGCGCGCCACGAGGAGCGCCCGGATGAGCACGGATTCGTCGCGCGCGAGTT
CCACCGTCGCTACCGCCTGCCGCCTGGCGTGGATCCGGCTGCCGTGACGTCCGCGCTGTCCCCCGAGGGC
GTCCTGTCCATCCAGGCCGCACCAGCGTCGGCCCAGGCCCCACCGCCAGCCGCAGCCAAGTAG

Translation (160 aa):
MEIPVPVQPSWLRRASAPLPGLSAPGRLFDQRFGEGLLEAELAALCPTTLAPYYLRAPSVALPVAQVPTD
PGHFSVLLDVKHFSPEEIAVKVVGEHVEVHARHEERPDEHGFVAREFHRRYRLPPGVDPAAVTSALSPEG
VLSIQAAPASAQAPPPAAAK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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