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Report for CCDS12322.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12322.1 Public Homo sapiens 19 TEKTL1 24 110 108 CCDS HistoryNCBI Gene:126402Re-query CCDS DB by CCDS ID:12322.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12322.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000292574.4 ENSP00000292574.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000292574.4Link to Ensembl Protein Viewer:ENSP00000292574.2Re-query CCDS DB by Nucleotide ID:ENST00000292574Re-query CCDS DB by Protein ID:ENSP00000292574
Original member Current member NCBI NM_173482.3 NP_775753.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173482.3Link to Protein Sequence:NP_775753.2Re-query CCDS DB by Nucleotide ID:NM_173482Re-query CCDS DB by Protein ID:NP_775753Link to BLAST:NP_775753.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775753.2 499 Q8IYK2 499 100% 0 0

Chromosomal Locations for CCDS 12322.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 15010826 15011395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15013672 15013776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15020461 15020659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15021353 15021519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15021616 15021711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15021806 15021919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15022871 15023119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1500 nt):
ATGCGCGTGTTGGTACCCCCGGCTGAGCGCAGCCAGGACACACGCGTTGGGGCCCCAGCATGGCGCGAGG
CAGCTCAGGCCATGGCGAGGACCGCGCACATTCTGACCGATCGCTGCGGGCAGGAGGCGGTGACCATGTG
GCAGCCCAAGGACAGCGTGCTGGACCCGAACGTGGCCCACCACCTCGGCCGCGCCGCCTACATCCAGCCC
TGGCGCTTCCGCGTGGAGATGATCAAAGGCGGCGGCACCTTGGAGAAGCCGCCGCCAGGCGAGGGCGTCA
CGCTGTGGAAGGGCAAGATGAAGCCGCCCGCCTGGTACGCCCGCCTGCCGCTACCCTTGCACCGCAAAGC
GCGCGCCCTGCAGACCACCGAGGTGGTGCACGCGCACGCGCGTGGAGCGCGCCTCACCGCCGCCCGCCTC
GGCCGCGCGCAGCACCAGATTAACGGGCGGGTGCGACAGCTGCTGCGCCAGCGCGAGGTCACCGACCACA
GGCTCAGCGAAGTGCGCAAGGGTCTGCTTATTAACCAGCAGAGCGTCAAGCTGCGGGGCTACAGGCCCAA
GTCTGAGAAGGTCCCTGACAAAGCTGACAGTATGCTTACATGGGAGAAAGAGGAGCTGAAAAGCATGAAG
AGGAAAATGGAGAGAGATATGGAAAAATCAGAGGTCCTACTCAAGACCCTGGCCTCCTGCCGAGACACTC
TGAACTTCTGCTTCAAGGAGCGGCTCCAAGCCGTGGACCTCATGAACCAGCCTCTGGACAAGGTTCTGGA
GCAGGCCAGACGCCACTCATGGGTGAACCTCTCCCGAGCCCCCACTCCACGCACACAGGGTCAGAAAACG
CCTCCTCCAGACCCTGTGGGCACCTATAACCCAGCGTGCGCCTTGGCGCTAAACGAAGCCAAGCGGTTGT
TGGTCGAGTCCAAGGACACCTTGGTAGAAATGGCAAAGAACGAGGTGGACGTCCGGGAGCAACAGCTGCA
GATAAGCGACCGTGTGTGTGCCTCGCTGGCGCAGAAGGCGAGCGAGACCTTGGAGCTGAAGGAAAGATTA
AATATGACGTTAGGACTGATGAGGGGAACTATCCTCCGGTGTACGAAATATAACCAAGAGTTGTACACCA
CCCACGGTCTCATCAAGGGTCCTCTGTCGAAAGTTCACCTGGAGACCGCAGAAAAGCTGGACAGACCCCT
GGTTCGCATGTACCAGAGACACGTGGGCACCCAACTCCCGGAGGCTGCGCGCCTCGCACAGGGCACCGAC
AAGCTGCAGTGCCACATCACGTACCTGGAAAAGAACCTGGACGAGCTGCTCGCCACGCACAAGAACCTCA
GCTGGGGCCTCAACTGCAAGAACATCGGGCATGAGGTGGACGGCAACGTGGTGCGCCTGCGCCTGCGCCA
GCGGCAACCGCACGTGTGCTACGAGCAGGCGCAGCGCCTGGTTAAGGACTGGGACCCGCGCACGCCGCCG
CCGCGCAGCAAGAGCAGCGCGGACCCCTAG

Translation (499 aa):
MRVLVPPAERSQDTRVGAPAWREAAQAMARTAHILTDRCGQEAVTMWQPKDSVLDPNVAHHLGRAAYIQP
WRFRVEMIKGGGTLEKPPPGEGVTLWKGKMKPPAWYARLPLPLHRKARALQTTEVVHAHARGARLTAARL
GRAQHQINGRVRQLLRQREVTDHRLSEVRKGLLINQQSVKLRGYRPKSEKVPDKADSMLTWEKEELKSMK
RKMERDMEKSEVLLKTLASCRDTLNFCFKERLQAVDLMNQPLDKVLEQARRHSWVNLSRAPTPRTQGQKT
PPPDPVGTYNPACALALNEAKRLLVESKDTLVEMAKNEVDVREQQLQISDRVCASLAQKASETLELKERL
NMTLGLMRGTILRCTKYNQELYTTHGLIKGPLSKVHLETAEKLDRPLVRMYQRHVGTQLPEAARLAQGTD
KLQCHITYLEKNLDELLATHKNLSWGLNCKNIGHEVDGNVVRLRLRQRQPHVCYEQAQRLVKDWDPRTPP
PRSKSSADP


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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