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Report for CCDS41139.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41139.1 Public Mus musculus X Tmsb15b1 23 108 98 CCDS HistoryNCBI Gene:666244Re-query CCDS DB by CCDS ID:41139.1Re-query CCDS DB by GeneID:666244See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41139.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000113071.1 ENSMUSP00000108694.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113071.1Link to Ensembl Protein Viewer:ENSMUSP00000108694.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113071Re-query CCDS DB by Protein ID:ENSMUSP00000108694
Original member Current member NCBI NM_001081983.1 NP_001075452.1 Accepted alive Link to Nucleotide Sequence:NM_001081983.1Link to Protein Sequence:NP_001075452.1Re-query CCDS DB by Nucleotide ID:NM_001081983Re-query CCDS DB by Protein ID:NP_001075452Link to BLAST:NP_001075452.1

Chromosomal Locations for CCDS 41139.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 136974202 136974239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136975398 136975497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (138 nt):
ATGAGCGATAAACCAGACTTGTCAGAAGTTGAAACGTTTGACAAATCAAAGTTGAAGAAAACTAATACTG
AAGTAAAAAATACTCTTCCGTCGAATGAAACTATCCAGCAAGAGAAAGAACATAATGAAAGAACATAA

Translation (45 aa):
MSDKPDLSEVETFDKSKLKKTNTEVKNTLPSNETIQQEKEHNERT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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