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Report for CCDS91193.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91193.1 Public Homo sapiens 1 OR2AJ1 24 110 108 CCDS HistoryNCBI Gene:127608Re-query CCDS DB by CCDS ID:91193.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Provisional (this record has not been manually reviewed by the collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 91193.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000318244.4 ENSP00000325078.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000318244.4Link to Ensembl Protein Viewer:ENSP00000325078.3Re-query CCDS DB by Nucleotide ID:ENST00000318244Re-query CCDS DB by Protein ID:ENSP00000325078
Original member Current member NCBI NM_001355235.2 NP_001342164.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001355235.2Link to Protein Sequence:NP_001342164.2Re-query CCDS DB by Nucleotide ID:NM_001355235Re-query CCDS DB by Protein ID:NP_001342164Link to BLAST:NP_001342164.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001342164.2 328 Q8NGZ0 328 100% 0 0

Chromosomal Locations for CCDS 91193.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 247933769 247934755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (987 nt):
ATGGGCCATCAGAATCACACTTTCAGCAGTGATTTCATACTTTTGGGATTGTTCTCTTCTTCCCCAACAA
GTGTGGTCTTCTTCTTAGTTTTATTTGTCATTTTCATTATGAGTGTAACAGAAAATACGCTCATGATCCT
CCTCATTCGCAGTGACTCCCGACTCCACACTCCAATGTATTTTCTGCTCAGCCATCTCTCCTTAATGGAT
ATCTTGCATGTTTCCAACATCGTTCCCAAAATGGTCACTAACTTTCTGTCAGGCAGCAGAACTATTTCAT
TTGCAGGTTGTGGGTTCCAGGTATTTCTGTCCCTCACCCTCCTGGGTGGTGAGTGCCTTCTCCTGGCTGC
AATGTCCTGTGATCGCTATGTGGCTATCTGTCACCCGCTGCGCTATCCGATTCTTATGAAGGAGTATGCC
AGCGCTCTCATGGCTGGAGGCTCCTGGCTCATTGGGGTTTTCAACTCCACAGTCCACACAGCTTATGCAC
TGCAGTTTCCCTTCTGTGGCTCTAGGGCAATTGATCACTTCTTCTGTGAAGTCCCTGCCATGTTGAAGTT
GTCCTGTGCAGACACAACACGCTATGAACGAGGGGTTTGTGTAAGTGCTGTGATCTTCCTGCTGATCCCT
TTCTCCTTGATCTCTGCTTCTTATGGCCAAATTATTCTTACTGTCCTCCAGATGAAATCATCAGAGGCAA
GGAAAAAGTCATTTTCCACTTGTTCCTTCCACATGATTGTGGTCACGATGTACTATGGGCCATTTATTTT
TACATATATGAGACCTAAATCATACCACACTCCAGGCCAGGATAAGTTCCTGGCAATATTCTATACGATC
CTCACACCCACACTCAACCCTTTCATCTACAGCTTTAGGAATAAAGATGTTCTGGCGGTGATGAAAAATA
TGCTCAAAAGTAACTTTCTGCACAAAAAAATGAATAGGAAAATTCCTGAATGTGTGTTCTGTCTATTTCT
ATGTTAA

Translation (328 aa):
MGHQNHTFSSDFILLGLFSSSPTSVVFFLVLFVIFIMSVTENTLMILLIRSDSRLHTPMYFLLSHLSLMD
ILHVSNIVPKMVTNFLSGSRTISFAGCGFQVFLSLTLLGGECLLLAAMSCDRYVAICHPLRYPILMKEYA
SALMAGGSWLIGVFNSTVHTAYALQFPFCGSRAIDHFFCEVPAMLKLSCADTTRYERGVCVSAVIFLLIP
FSLISASYGQIILTVLQMKSSEARKKSFSTCSFHMIVVTMYYGPFIFTYMRPKSYHTPGQDKFLAIFYTI
LTPTLNPFIYSFRNKDVLAVMKNMLKSNFLHKKMNRKIPECVFCLFLC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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