NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS42894.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42894.1 Public Homo sapiens 20 ZNF831 24 110 108 CCDS HistoryNCBI Gene:128611Re-query CCDS DB by CCDS ID:42894.1See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42894.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371030.4 ENSP00000360069.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371030.4Link to Ensembl Protein Viewer:ENSP00000360069.2Re-query CCDS DB by Nucleotide ID:ENST00000371030Re-query CCDS DB by Protein ID:ENSP00000360069
Original member Current member EBI ENST00000637017.1 ENSP00000490240.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000637017.1Link to Ensembl Protein Viewer:ENSP00000490240.1Re-query CCDS DB by Nucleotide ID:ENST00000637017Re-query CCDS DB by Protein ID:ENSP00000490240
Original member Current member NCBI NM_001384354.1 NP_001371283.1 Accepted alive Link to Nucleotide Sequence:NM_001384354.1Link to Protein Sequence:NP_001371283.1Re-query CCDS DB by Nucleotide ID:NM_001384354Re-query CCDS DB by Protein ID:NP_001371283Link to BLAST:NP_001371283.1
Original member Current member NCBI NM_178457.3 NP_848552.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178457.3Link to Protein Sequence:NP_848552.1Re-query CCDS DB by Nucleotide ID:NM_178457Re-query CCDS DB by Protein ID:NP_848552Link to BLAST:NP_848552.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001371283.1 1677 Q5JPB2 1677 100% 0 0
NP_848552.1 1677 Q5JPB2 1677 100% 0 0

Chromosomal Locations for CCDS 42894.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 59191020 59194757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 59195869 59196005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 59206905 59207056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 59252978 59253138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 59253898 59254743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5034 nt):
ATGGAGGTTCCAGAACCCACCTGCCCTGCCCCTCCTGCGAGGGACCAGCCAGCTCCCACTCCTGGCCCTC
CAGGGGCCCCAGGTGGCCAGGCCTCACCTCACCTGACCCTGGGCCCTGTCCTTCTGCCGCCAGAGCAGGG
CCTGGCCCCCCCCACTGTGTTCCTGAAGGCCCTGCCCATCCCACTGTACCACACGGTGCCTCCCGGGGGC
CTCCAGCCCCGCGCCCCGCTAGTGACGGGCAGCCTAGATGGGGGCAACGTGCCCTTCATACTCAGCCCTG
TGCTGCAGCCTGAAGGGCCTGGCCCCACCCAGGTGGGGAAGCCGGCGGCCCCTACGCTGACGGTGAACAT
CGTGGGCACTCTGCCTGTCCTGTCGCCGGGCCTGGGCCCCACGCTGGGCAGCCCAGGCAAGGTGCGGAAT
GCGGGCAAGTACCTGTGTCCGCACTGTGGTCGCGACTGCCTGAAGCCCAGTGTTCTAGAGAAGCACATCC
GGTCCCACACGGGTGAGAGGCCCTTCCCGTGTGCCACCTGCGGCATCGCCTTTAAGACCCAGAGCAATCT
CTACAAGCACAGGCGGACGCAGACGCACCTCAACAACTCCCGGCTGTCCTCAGAGTCCGAGGGCGCCGGG
GGCGGCCTCCTGGAGGAAGGGGACAAGGCCGGAGAGCCCCCCAGACCAGAGGGCAGGGGCGAGAGCAGGT
GCCAGGGGATGCACGAAGGCGCCTCGGAGAGACCCCTTTCTCCGGGTGCCCACGTGCCCCTACTTGCCAA
GAACCTGGATGTGAGGACCGAAGCTGCTCCCTGTCCAGGGTCCGCATTTGCCGACAGAGAGGCTCCTTGG
GACTCTGCCCCCATGGCGTCACCTGGGCTCCCAGCGGCCAGCACACAACCCTGGCGTAAGTTGCCAGAGC
AGAAGTCGCCGACCGCCGGGAAGCCGTGCGCCCTGCAGCGGCAGCAGGCGACGGCAGCGGAGAAGCCCTG
GGATGCCAAGGCCCCCGAGGGCCGGCTGCGGAAGTGTGAGAGCACCGACTCGGGGTACCTGTCGCGCTCC
GACAGCGCGGAGCAGCCGCATGCGCCCTGCAGCCCCCTGCACAGCCTTTCGGAGCACAGCGCCGAGTCCG
AGGGGGAGGGCGGCCCGGGCCCGGGGCCAGGGGTCGCAGGGGCCGAGCCCGGGGCGCGAGAAGCCGGCCT
GGAGCTGGAGAAGAAGCGGCTGGAGGAGCGCATCGCCCAGCTCATCTCCCACAACCAGGCGGTGGTGGAC
GATGCCCAGCTGGACAACGTGCGGCCCCGGAAGACCGGGCTGTCCAAACAGGGCAGCATCGACCTGCCCA
CGCCCTACACCTACAAGGACTCCTTCCACTTTGACATCCGCGCGCTGGAGCCAGGCCGTAGGAGGGCCCC
GGGCCCCGTGCGCTCCACCTGGACGCCCCCAGACAAGTCTCGGCCCCTCTTCTTCCACTCCGTCCCCACT
CAGCTCTCCACCACCGTGGAATGTGTCCCCGTCACCAGGAGCAACTCGCTGCCCTTCGTCGAGGGCTCCA
GGACGTGGCTGGAGCCCAGGGAGCCCCGGGACCCCTGGTCCAGGACGCAGAAGCCTCTGAGCCCCAGGCC
CGGCCCAGCCCGCCTGGGCTGCCGCTCGGGACTAAGCTCGACTGACGTTCCCAGTGGGCATCCCCGGGCC
CTGGTCAGACAGGCCGCGGTGGAGGACCTGCCAGGCACCCCCATTGGCGATGCCCTGGTGCCCGCAGAGG
ACACAGACGCAAAGAGAACTGCTGCGCGGGAGGCCATGGCCGGCAAGGGCAGAGCGGGCGGCAGGAAGTG
CGGCCAGAGAAGGCTGAAGATGTTCTCCCAGGAGAAGTGGCAGGTGTACGGGGATGAGACGTTCAAAAGG
ATCTACCAGAAAATGAAAGCCAGTCCCCATGGAGGCAAGAAAGCCAGGGAGGTGGGAATGGGCAGTGGGG
CAGAACTGGGCTTTCCTCTGCAGAAAGAGGCAGCAGGGAGCTCAGGCACAGTCCCCACCCAAGACAGGAG
GACCCCTGTCCATGAGGACATATCCGCAGGGGCAACGCCAGAGCCTTGGGGAAATCCACCAGCCCTGGAG
GCCTCCTTGGTGACTGAACCCACTAAGCATGGGGAGACGGTGGCCAGGAGAGGAGACAGTGACCGACCCA
GGGTGGAAGAGGCTGTGTCATCCCCTGCACTGGGTGGCAGAGACAGTCCCTGTTCAGGCAGTAGGAGCCC
CCTGGTCTCTCCAAATGGGAGGCTGGAACTGGGGTGGCAGATGCCCCCAGCACCTGGCCCCCTCAAAGGG
GGTGATGTAGAGGCTCCCAGGCCAGTTTGGCCGGACCCCAAGCTGGAAGGAGGTGCCCGAGGTGTGGGGG
ATGTTCAGGAGACCTGCCTGTGGGCCCAGACTGTCCTGAGATGGCCCAGCAGGGGCTCAGGGGAGGACAA
GCTCCCCTCAGAGAGGAAGAAGCTGAAAGTGGAGGACCTGCACAGCTGGAAGCAACCAGAGCCTGTGAGC
GCAGAGACCCCAGGTGGGCCCACGCAGCCTGCCTCTTTGTCATCCCAGAAGCAGGATGCCGATCCCGGGG
AGGTGCCAGGGGGCTCAAAGGAGAGTGCCAGGCAGGTGGGCGAGCCTCTGGAGTCCTCTGGAGCCTCCTT
GGCTGCTGCTTCTGTTGCCCTGAAGAGGGTGGGGCCAAGGGACAAGGCTACCCCACTGCATCCTGCAGCC
CCAGCCCCCGCAGAGCACCCCTCGCTGGCCACCCCACCTCAGGCTCCTAGAGTGCTCTCTGCCCTGGCAG
ATAATGCCTTTTCCCCCAAGTACCTCCTCAGGTTACCTCAGGCAGAGACCCCCTTACCACTGCCCATTCC
CTGGGGACCAAGGCACAGCCAGGACTCTCTCTGCAGCAGTGGGTGGCCTGAAGAACGGGCATCATTTGTT
GGGTCAGGACTGGGGACCCCTCTTTCTCCCAGCCCAGCCTCAGGCCCCTCCCCAGGTGAGGCGGACAGCA
TCCTGGAGGACCCCAGCTGTTCCAGGCCACAGGATGGGAGAAAAGGGGCACAGTTGGGGGGGGACAAGGG
GGACAGGATGGCCACTAGCAGGCCAGCAGCCAGGGAGTTGCCCATCTCAGCACCAGGGGCTCCCAGGGAG
GCTACCTCCTCCCCGCCCACTCCAACGTGTGAGGCACACTTAGTTCAGGACATGGAGGGTGACAGCCACC
GTATCCATCGCCTCTGCATGGGCAGCACTTTGGCAAGGGCCAGGCTCTCTGGGGATGTCCTGAATCCCTG
GGTACCCAACTGGGAGCTGGGGGAGCCTCCTGGGAATGCCCCAGAAGATCCTTCTTCAGGGCCCCTGGTG
GGCCCCGACCCGTGTTCCCCCCTCCAGCCTGGCTCCTTCCTCACTGCCCTCACTCGGCCTCAGGGTGTGC
CCCCAGGCTGGCCAGAGCTGGCCTTGTCTTCCCACTCAGGGACGTCCCGGAGCCACAGCACCCGCAGTCC
CCACAGCACCCAAAACCCCTTTCCCTCACTGAAGGCTGAGCCGCGGCTCACGTGGTGTTGCCTGAGCCGC
AGTGTCCCTCTGCCCGCGGAGCAGAAGGCAAAGGCGGCATCTGTGTACTTGGCGGTGCACTTTCCTGGTA
GCAGCCTCCGAGATGAGGGTCCCAATGGCCCTCCTGGGAGCAATGGAGGATGGACCTGGACAAGCCCTGG
AGAAGGAGGGCCGGCGCAGATGTCCAAGTTCTCCTACCCAACAGTCCCAGGGGTGATGCCCCAGCACCAG
GTGTCTGAGCCAGAATGGAAGAAAGGCCTGCCTTGGAGGGCAAAGATGTCTCGTGGGAACAGCAAGCAGA
GAAAACTGAAGATCAACCCTAAAAGGTACAAAGGGAATTTCTTGCAGAGCTGTGTTCAGCTGAGAGCCAG
TAGACTTCGCACACCAACCTGGGTGCGAAGAAGAAGCCGCCACCCTCCCGCACTTGAGGGACTGAAGCCA
TGCAGGACCCCTGGGCAGACCTCTTCAGAAATAGCAGGTCTGAATCTGCAAGAGGAGCCATCTTGTGCCA
CCTCAGAATCACCTCCTTGTTGTGGGAAGGAAGAGAAGAAGGAAGGTGACTGCAGACAAACCTTAGGAAC
CCTCTCTCTTGGTACAAGTTCAAGAATTGTCAGGGAAATGGACAAACGAACTGTGAAGGATATTTCTCCA
TCTGCTGGTGAGCATGGTGACTGTACTACTCACAGCACTGCTGCCACATCAGGATTATCTCTGCAATCTG
ACACCTGCCTGGCAGTGGTTAATGACGTGCCTCTACCCCCTGGCAAAGGTCTTGACCTTGGGTTGCTGGA
GACTCAGCTGCTGGCCTCCCAGGATTCAGTCTCAACAGATCCCAAACCATACATCTTCTCAGATGCTCAA
AGGCCTTCTTCCTTTGGGTCCAAAGGAACTTTTCCCCACCATGACATTGCTACCTCTGTGGCTGCCGTTT
GTATTTCTCTGCCAGTGAGAACAGATCACATAGCCCAGGAAATTCACAGTGCTGAATCACGAGACCACAG
CCAGACTGCAGGGAGGACTCTGACATCAAGCTCCCCAGACAGCAAAGTCACAGAAGAGGGCAGAGCACAG
ACCCTCTTGCCAGGGAGACCTTCATCTGGACAAAGAATTTCAGATTCGGTTCCACTGGAGTCAACTGAAA
AAACTCATCTTGAAATACCAGCTTCAGGACCAAGTTCAGCTAGTTCACACCACAAGGAAGGGAGACACAA
GACGTTTTTTCCTTCCAGAGGCCAGTATGGGTGTGGGGAAATGACTGTCCCCTGCCCCTCTTTAGGAAGT
GACGGTAGGAAACGTCAGGTATCTGGATTAATCACTCGGAAAGATTCTGTGGTTCCTTCTAAGCCAGAGC
AGCCCATAGAAATTCCTGAAGCCCCTTCTAAATCCCTCAAGAAGAGGAGTCTGGAAGGAATGAGAAAGCA
AACTCGAGTAGAGTTCAGTGACACCAGCAGCGACGATGAAGACCGATTAGTTATAGAAATATGA

Translation (1677 aa):
MEVPEPTCPAPPARDQPAPTPGPPGAPGGQASPHLTLGPVLLPPEQGLAPPTVFLKALPIPLYHTVPPGG
LQPRAPLVTGSLDGGNVPFILSPVLQPEGPGPTQVGKPAAPTLTVNIVGTLPVLSPGLGPTLGSPGKVRN
AGKYLCPHCGRDCLKPSVLEKHIRSHTGERPFPCATCGIAFKTQSNLYKHRRTQTHLNNSRLSSESEGAG
GGLLEEGDKAGEPPRPEGRGESRCQGMHEGASERPLSPGAHVPLLAKNLDVRTEAAPCPGSAFADREAPW
DSAPMASPGLPAASTQPWRKLPEQKSPTAGKPCALQRQQATAAEKPWDAKAPEGRLRKCESTDSGYLSRS
DSAEQPHAPCSPLHSLSEHSAESEGEGGPGPGPGVAGAEPGAREAGLELEKKRLEERIAQLISHNQAVVD
DAQLDNVRPRKTGLSKQGSIDLPTPYTYKDSFHFDIRALEPGRRRAPGPVRSTWTPPDKSRPLFFHSVPT
QLSTTVECVPVTRSNSLPFVEGSRTWLEPREPRDPWSRTQKPLSPRPGPARLGCRSGLSSTDVPSGHPRA
LVRQAAVEDLPGTPIGDALVPAEDTDAKRTAAREAMAGKGRAGGRKCGQRRLKMFSQEKWQVYGDETFKR
IYQKMKASPHGGKKAREVGMGSGAELGFPLQKEAAGSSGTVPTQDRRTPVHEDISAGATPEPWGNPPALE
ASLVTEPTKHGETVARRGDSDRPRVEEAVSSPALGGRDSPCSGSRSPLVSPNGRLELGWQMPPAPGPLKG
GDVEAPRPVWPDPKLEGGARGVGDVQETCLWAQTVLRWPSRGSGEDKLPSERKKLKVEDLHSWKQPEPVS
AETPGGPTQPASLSSQKQDADPGEVPGGSKESARQVGEPLESSGASLAAASVALKRVGPRDKATPLHPAA
PAPAEHPSLATPPQAPRVLSALADNAFSPKYLLRLPQAETPLPLPIPWGPRHSQDSLCSSGWPEERASFV
GSGLGTPLSPSPASGPSPGEADSILEDPSCSRPQDGRKGAQLGGDKGDRMATSRPAARELPISAPGAPRE
ATSSPPTPTCEAHLVQDMEGDSHRIHRLCMGSTLARARLSGDVLNPWVPNWELGEPPGNAPEDPSSGPLV
GPDPCSPLQPGSFLTALTRPQGVPPGWPELALSSHSGTSRSHSTRSPHSTQNPFPSLKAEPRLTWCCLSR
SVPLPAEQKAKAASVYLAVHFPGSSLRDEGPNGPPGSNGGWTWTSPGEGGPAQMSKFSYPTVPGVMPQHQ
VSEPEWKKGLPWRAKMSRGNSKQRKLKINPKRYKGNFLQSCVQLRASRLRTPTWVRRRSRHPPALEGLKP
CRTPGQTSSEIAGLNLQEEPSCATSESPPCCGKEEKKEGDCRQTLGTLSLGTSSRIVREMDKRTVKDISP
SAGEHGDCTTHSTAATSGLSLQSDTCLAVVNDVPLPPGKGLDLGLLETQLLASQDSVSTDPKPYIFSDAQ
RPSSFGSKGTFPHHDIATSVAAVCISLPVRTDHIAQEIHSAESRDHSQTAGRTLTSSSPDSKVTEEGRAQ
TLLPGRPSSGQRISDSVPLESTEKTHLEIPASGPSSASSHHKEGRHKTFFPSRGQYGCGEMTVPCPSLGS
DGRKRQVSGLITRKDSVVPSKPEQPIEIPEAPSKSLKKRSLEGMRKQTRVEFSDTSSDDEDRLVIEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH