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Report for CCDS1694.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1694.1 Public Homo sapiens 2 OSR1 24 110 108 CCDS HistoryNCBI Gene:130497Re-query CCDS DB by CCDS ID:1694.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1694.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000272223.3 ENSP00000272223.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000272223.3Link to Ensembl Protein Viewer:ENSP00000272223.2Re-query CCDS DB by Nucleotide ID:ENST00000272223Re-query CCDS DB by Protein ID:ENSP00000272223
Original member Current member NCBI NM_145260.3 NP_660303.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145260.3Link to Protein Sequence:NP_660303.1Re-query CCDS DB by Nucleotide ID:NM_145260Re-query CCDS DB by Protein ID:NP_660303Link to BLAST:NP_660303.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_660303.1 266 Q8TAX0 266 100% 0 0

Chromosomal Locations for CCDS 1694.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 19352275 19352410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 19353141 19353805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (801 nt):
ATGGGCAGCAAAACCTTGCCGGCGCCGGTGCCTATCCACCCTTCCCTGCAGCTCACCAACTACTCCTTCC
TTCAGGCAGTGAACGGCCTGCCCACAGTGCCTTCGGACCATCTGCCCAACCTGTATGGTTTCAGCGCGTT
GCACGCTGTGCACCTGCATCAGTGGACGCTGGGCTACCCGGCCATGCACTTGCCGCGCTCTTCTTTCTCC
AAAGTGCCGGGCACGGTGTCCAGCTTGGTGGATGCGCGCTTCCAGCTGCCCGCCTTTCCCTGGTTCCCTC
ATGTCATTCAACCCAAGCCCGAGATCACCGCTGGAGGCAGCGTTCCAGCGCTCAAGACCAAGCCGCGCTT
TGATTTTGCCAACCTGGCCTTGGCAGCAACGCAAGAAGATCCGGCCAAGCTCGGTCGCGGGGAGGGCCCA
GGCTCCCCTGCAGGTGGGCTGGGTGCCCTCCTCGACGTGACCAAGCTGTCTCCAGAAAAGAAGCCCACAA
GGGGACGTCTGCCTTCCAAGACCAAGAAGGAATTCGTCTGCAAGTTCTGTGGCCGCCACTTCACCAAGTC
CTACAACCTACTTATCCATGAGCGGACGCACACCGACGAGCGGCCCTACACCTGTGACATCTGCCACAAA
GCCTTCCGGAGGCAAGACCACCTGCGAGACCACAGATATATTCACTCCAAAGAGAAGCCCTTCAAGTGTC
AAGAGTGTGGGAAAGGATTCTGCCAGTCCAGGACTCTCGCTGTCCACAAGACGCTACACTCACAGGTGAA
GGAGCTCAAAACCTCCAAGATCAAATGCTAA

Translation (266 aa):
MGSKTLPAPVPIHPSLQLTNYSFLQAVNGLPTVPSDHLPNLYGFSALHAVHLHQWTLGYPAMHLPRSSFS
KVPGTVSSLVDARFQLPAFPWFPHVIQPKPEITAGGSVPALKTKPRFDFANLALAATQEDPAKLGRGEGP
GSPAGGLGALLDVTKLSPEKKPTRGRLPSKTKKEFVCKFCGRHFTKSYNLLIHERTHTDERPYTCDICHK
AFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHSQVKELKTSKIKC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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