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Report for CCDS29793.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29793.1 Public Mus musculus 19 Cyp2c29 23 108 98 CCDS HistoryNCBI Gene:13095Re-query CCDS DB by CCDS ID:29793.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29793.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000003137.14 ENSMUSP00000003137.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000003137.14Link to Ensembl Protein Viewer:ENSMUSP00000003137.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000003137Re-query CCDS DB by Protein ID:ENSMUSP00000003137
Original member NCBI NM_007815.3 NP_031841.3 Updated not alive Link to Nucleotide Sequence:NM_007815.3Link to Protein Sequence:NP_031841.3Re-query CCDS DB by Nucleotide ID:NM_007815Re-query CCDS DB by Protein ID:NP_031841
Current member NCBI NM_007815.4 NP_031841.3 Accepted alive Link to Nucleotide Sequence:NM_007815.4Link to Protein Sequence:NP_031841.3Re-query CCDS DB by Nucleotide ID:NM_007815Re-query CCDS DB by Protein ID:NP_031841Link to BLAST:NP_031841.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031841.3 490 Q64458 490 100% 0 0

Chromosomal Locations for CCDS 29793.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 39287118 39287285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39290729 39290891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39291057 39291206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39307608 39307768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39309655 39309831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39321551 39321692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39324906 39325093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39329104 39329245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39330252 39330433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1473 nt):
ATGGATCTGGTCGTGTTCCTAGCGCTCACTCTATCCTGTCTTATTCTCCTCTCACTATGGAGACAGAGCT
CTGGGAGAGGGAAGCTCCCTCCTGGCCCCACGCCTCTCCCAATTATTGGTAACTTCCTCCAGATAGATGT
GAAGAACATCAGCCAATCCTTCACCAACTTCTCAAAAGCTTATGGCCCTGTGTTCACTCTGTATTTGGGC
TCAAAGCCTACTGTCATATTGCATGGGTATGAAGCAGTGAAGGAAGCTCTGATTGATCGTGGGGAGGAGT
TTGCTGGTAGAGGAAGCTTTCCAATGGCTGAAAAAATTATTAAAGGTTTTGGCGTTGTTTTTAGCAATGG
AAACAGATGGAAAGAGATGAGACGATTTACACTCATGACCCTGCGAAATTTGGGCATGGGGAAAAGGAAC
ATTGAGGACCGTGTTCAAGAGGAAGCACAGTGTCTTGTGGAAGAACTGAGGAAAACCAAAGGCTCACCCT
GTGACCCCACCTTCATCCTGAGCTGTGCTCCATGCAATGTCATCTGCTCAATTATTTTCCAGAATCGTTT
TGATTATAAGGATAAGGAATTTCTTATCCTCATGGATAAAATAAATGAGAATGTCAAGATTCTGAGCTCC
CCATGGTTGCAGGTCTGCAATAGTTTCCCTTCACTCATTGACTATTGTCCTGGAAGTCATCACAAAATAG
TAAAAAATTTTAATTATCTAAAAAGTTATTTGTTGGAGAAAATAAAAGAACACAAGGAATCACTGGATGT
TACAAACCCCCGTGACTTTATTGATTATTACCTAATTAAACAAAAACAGGTAAACCACATTGAACAATCA
GAGTTTTCACTTGAAAATCTGGCAAGCACTATCAATGACCTCTTTGGTGCAGGGACAGAGACCACAAGCA
CAACACTGAGATATGCTCTCCTACTCCTGCTGAAGTACCCAGATGTCACAGCTAAAGTCCAGGAAGAGAT
TGACCGTGTGGTTGGCAGGCACCGCAGCCCCTGCATGCAAGACAGGAGCCACATGCCCTATACAGACGCC
ATGATTCATGAGGTCCAGAGATTCATCGACCTCCTCCCCACTAGCCTGCCTCATGCAGTGACCTGTGACA
TTAAATTCAGGAAATACCTCATCCCCAAGGGAACTACAGTAATAACATCACTGTCATCAGTGCTGCATGA
CAGCAAGGAGTTTCCCAACCCAGAGATGTTTGACCCTGGGCACTTTCTAAATGGGAATGGAAACTTTAAG
AAAAGTGACTACTTCATGCCTTTTTCAACAGGAAAACGGATTTGTGCTGGAGAGGGCCTGGCCCGCATGG
AGCTGTTTCTAATCCTGACAACCATTTTACAGAACTTCAAACTGAAATCTCTGGTCCACCCAAAAGAAAT
TGATATTACCCCAGTGATGAATGGATTTGCCTCTCTGCCACCCCCTTACCAGCTCTGCTTCATTCCTCTC
TAA

Translation (490 aa):
MDLVVFLALTLSCLILLSLWRQSSGRGKLPPGPTPLPIIGNFLQIDVKNISQSFTNFSKAYGPVFTLYLG
SKPTVILHGYEAVKEALIDRGEEFAGRGSFPMAEKIIKGFGVVFSNGNRWKEMRRFTLMTLRNLGMGKRN
IEDRVQEEAQCLVEELRKTKGSPCDPTFILSCAPCNVICSIIFQNRFDYKDKEFLILMDKINENVKILSS
PWLQVCNSFPSLIDYCPGSHHKIVKNFNYLKSYLLEKIKEHKESLDVTNPRDFIDYYLIKQKQVNHIEQS
EFSLENLASTINDLFGAGTETTSTTLRYALLLLLKYPDVTAKVQEEIDRVVGRHRSPCMQDRSHMPYTDA
MIHEVQRFIDLLPTSLPHAVTCDIKFRKYLIPKGTTVITSLSSVLHDSKEFPNPEMFDPGHFLNGNGNFK
KSDYFMPFSTGKRICAGEGLARMELFLILTTILQNFKLKSLVHPKEIDITPVMNGFASLPPPYQLCFIPL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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