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Report for CCDS20184.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20184.1 Public Mus musculus 6 Pyurf 23 108 98 CCDS HistoryNCBI Gene:66459Re-query CCDS DB by CCDS ID:20184.1Re-query CCDS DB by GeneID:66459See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20184.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000053386.5 ENSMUSP00000050958.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000053386.5Link to Ensembl Protein Viewer:ENSMUSP00000050958.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000053386Re-query CCDS DB by Protein ID:ENSMUSP00000050958
Original member Current member NCBI NM_025574.3 NP_079850.1 Accepted alive Link to Nucleotide Sequence:NM_025574.3Link to Protein Sequence:NP_079850.1Re-query CCDS DB by Nucleotide ID:NM_025574Re-query CCDS DB by Protein ID:NP_079850Link to BLAST:NP_079850.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079850.1 112 Q9D1C3 112 100% 0 0

Chromosomal Locations for CCDS 20184.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 57689737 57689878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 57691809 57692005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (339 nt):
ATGCTGAGCGCCACGTGCCGCAGGCTCGCCCCGGCGCTGCGGAGGCTCCGCGCACTGTCTGCAGTCGCCG
GGAGGTTTCTGCAAGTGCCCGGGGCCAGGCTCTGCTCTGACCAGAGCGAGAGGGCTGAGCAGCCCCACAC
CTTCCACCCGGCGCTGCTGCAGTTCCTGGTGTGTCCGCTCTCCAAGAAGCCGCTTAGATATGAAGCATCG
ACAAATGAATTGGTTAATGAAGAGTTGGGAATAGCATATCCAATCATTGATGGGATCCCTAATATGATAC
CACAGGCAGCAAGGACCACACGTCAAAATGAGAAGCAAGAAGAAGCTGAGCAACCCTAG

Translation (112 aa):
MLSATCRRLAPALRRLRALSAVAGRFLQVPGARLCSDQSERAEQPHTFHPALLQFLVCPLSKKPLRYEAS
TNELVNEELGIAYPIIDGIPNMIPQAARTTRQNEKQEEAEQP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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