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Report for CCDS4361.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4361.1 Public Homo sapiens 5 NUDCD2 24 110 108 CCDS HistoryNCBI Gene:134492Re-query CCDS DB by CCDS ID:4361.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4361.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302764.9 ENSP00000304854.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000302764.9Link to Ensembl Protein Viewer:ENSP00000304854.3Re-query CCDS DB by Nucleotide ID:ENST00000302764Re-query CCDS DB by Protein ID:ENSP00000304854
Original member Current member NCBI NM_145266.6 NP_660309.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145266.6Link to Protein Sequence:NP_660309.1Re-query CCDS DB by Nucleotide ID:NM_145266Re-query CCDS DB by Protein ID:NP_660309Link to BLAST:NP_660309.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_660309.1 157 Q8WVJ2 157 100% 0 0

Chromosomal Locations for CCDS 4361.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 163453967 163454050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 163456929 163457080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 163457562 163457610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 163459862 163460050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (474 nt):
ATGTCGGCCCCGTTTGAGGAGCGGAGTGGGGTGGTACCGTGCGGGACCCCGTGGGGCCAGTGGTACCAGA
CCTTGGAGGAGGTGTTCATTGAAGTTCAGGTGCCGCCAGGCACGCGCGCCCAGGATATCCAGTGCGGCCT
CCAGAGCCGGCATGTGGCGCTGTCGGTGGGCGGCCGCGAGATCCTCAAGGGCAAACTCTTTGATTCTACA
ATAGCTGATGAGGGAACATGGACTTTGGAGGACAGAAAAATGGTTCGTATTGTTCTTACAAAGACAAAGA
GAGATGCAGCAAATTGTTGGACTTCTCTACTAGAATCTGAATATGCAGCGGATCCTTGGGTGCAAGACCA
AATGCAGAGAAAGCTTACATTAGAGAGATTCCAAAAAGAAAATCCTGGTTTTGACTTCAGTGGAGCAGAA
ATCTCAGGAAACTACACTAAAGGTGGACCAGATTTCTCAAACCTTGAGAAATAA

Translation (157 aa):
MSAPFEERSGVVPCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALSVGGREILKGKLFDST
IADEGTWTLEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRKLTLERFQKENPGFDFSGAE
ISGNYTKGGPDFSNLEK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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