NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS19991.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19991.1 Public Mus musculus 6 Akr1b8 23 108 98 CCDS HistoryNCBI Gene:14187Re-query CCDS DB by CCDS ID:19991.1Re-query CCDS DB by GeneID:14187See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19991.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000038406.6 ENSMUSP00000040244.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000038406.6Link to Ensembl Protein Viewer:ENSMUSP00000040244.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000038406Re-query CCDS DB by Protein ID:ENSMUSP00000040244
Original member Current member NCBI NM_008012.2 NP_032038.1 Accepted alive Link to Nucleotide Sequence:NM_008012.2Link to Protein Sequence:NP_032038.1Re-query CCDS DB by Nucleotide ID:NM_008012Re-query CCDS DB by Protein ID:NP_032038Link to BLAST:NP_032038.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032038.1 316 P45377 316 100% 0 0

Chromosomal Locations for CCDS 19991.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 34354231 34354296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34356256 34356423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34357461 34357577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34358131 34358208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34363332 34363454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34363722 34363828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34364237 34364318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34365207 34365290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34365903 34365985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34368126 34368168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGGCCACGTTCGTGGAACTCAGTACCAAAGCCAAGATGCCCATTGTGGGCCTGGGCACCTGGAAGTCTC
CCCCAAACCAAGTCAAAGAAGCTGTGAAGGCGGCCATTGACGCTGGGTATCGCCATATCGACTGCGCGTA
TGCCTATTGCAACGAGAATGAGGTGGGAGAAGCCATCCAAGAGAAGATCAAAGAGAAGGCTGTGCAGCGG
GAGGACCTCTTCATTGTCAGCAAGCTGTGGCCCACCTGCTTTGAGAAGAAACTGCTAAAGGAAGCCTTTC
AGAAGACCCTCACGGATCTGAAGCTGGACTATTTGGACCTCTATCTTATTCACTGGCCACAGGGACTTCA
GCCAGGAAAGGAGTTATTCCCCAAAGATGACCAAGGCAGAATCCTCACCAGTAAGACAACATTCTTGGAA
GCCTGGGAGGGCATGGAGGAACTGGTGGACCAGGGGCTGGTGAAAGCTCTGGGCGTCTCCAACTTCAACC
ACTTCCAGATTGAAAGGCTCCTGAACAAGCCTGGACTGAAACATAAGCCAGTGACCAACCAGGTTGAGTG
TCATCCTTACCTCACCCAGGAAAAACTGATCCAGTACTGTCACTCGAAGGGCATCTCTGTCACTGCCTAC
AGTCCCCTGGGCTCCCCAGACAGGCCTAGCGCCAAGCCAGAGGACCCTTCACTATTAGAGGACCCCAAAA
TTAAAGAGATTGCCGCCAAGCACGAGAAAACCTCAGCCCAGGTTCTGATTCGGTTTCACATCCAGAGGAA
CGTGGTGGTGATCCCGAAGTCTGTGACGCCATCACGTATACAGGAGAACATTCAGGTCTTTGATTTCCAG
TTGAGTGACGAGGAGATGGCCACTATCCTTAGCTTCAACAGAAACTGGAGGGCCTGCCTGCTGCCTGAGA
CAGTAAACATGGAAGAATATCCCTATGATGCAGAATACTGA

Translation (316 aa):
MATFVELSTKAKMPIVGLGTWKSPPNQVKEAVKAAIDAGYRHIDCAYAYCNENEVGEAIQEKIKEKAVQR
EDLFIVSKLWPTCFEKKLLKEAFQKTLTDLKLDYLDLYLIHWPQGLQPGKELFPKDDQGRILTSKTTFLE
AWEGMEELVDQGLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLTQEKLIQYCHSKGISVTAY
SPLGSPDRPSAKPEDPSLLEDPKIKEIAAKHEKTSAQVLIRFHIQRNVVVIPKSVTPSRIQENIQVFDFQ
LSDEEMATILSFNRNWRACLLPETVNMEEYPYDAEY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH