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Report for CCDS6844.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6844.1 Public Homo sapiens 9 OR1N1 24 110 108 CCDS HistoryNCBI Gene:138883Re-query CCDS DB by CCDS ID:6844.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6844.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000304880.2 ENSP00000306974.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000304880.2Link to Ensembl Protein Viewer:ENSP00000306974.2Re-query CCDS DB by Nucleotide ID:ENST00000304880Re-query CCDS DB by Protein ID:ENSP00000306974
Original member Current member NCBI NM_012363.1 NP_036495.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012363.1Link to Protein Sequence:NP_036495.1Re-query CCDS DB by Nucleotide ID:NM_012363Re-query CCDS DB by Protein ID:NP_036495Link to BLAST:NP_036495.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036495.1 311 Q8NGS0 311 100% 0 0

Chromosomal Locations for CCDS 6844.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 122526358 122527293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (936 nt):
ATGGAAAACCAATCCAGCATTTCTGAATTTTTCCTCCGAGGAATATCAGCGCCTCCAGAGCAACAGCAGT
CCCTCTTCGGAATTTTCCTGTGTATGTATCTTGTCACCTTGACTGGGAACCTGCTCATCATCCTGGCCAT
TGGCTCTGACCTGCACCTCCACACCCCCATGTACTTTTTCTTGGCCAACCTGTCTTTTGTTGACATGGGT
TTAACGTCCTCCACAGTTACCAAGATGCTGGTGAATATACAGACTCGGCATCACACCATCTCCTATACGG
GTTGCCTCACGCAAATGTATTTCTTTCTGATGTTTGGTGATCTAGACAGCTTCTTCCTGGCTGCCATGGC
GTATGACCGCTATGTGGCCATTTGCCACCCCCTCTGCTACTCCACAGTCATGAGGCCCCAAGTCTGTGCC
CTAATGCTTGCATTGTGCTGGGTCCTCACCAATATCGTTGCCCTGACTCACACGTTCCTCATGGCTCGGT
TGTCCTTCTGTGTGACTGGGGAAATTGCTCACTTTTTCTGTGACATCACTCCTGTCCTGAAGCTGTCATG
TTCTGACACCCACATCAACGAGATGATGGTTTTTGTCTTGGGAGGCACCGTACTCATCGTCCCCTTTTTA
TGCATTGTCACCTCCTACATCCACATTGTGCCAGCTATCCTGAGGGTCCGAACCCGTGGTGGGGTGGGCA
AGGCCTTTTCCACCTGCAGTTCCCACCTCTGCGTTGTTTGTGTGTTCTATGGGACCCTCTTCAGTGCCTA
CCTGTGTCCTCCCTCCATTGCCTCTGAAGAGAAGGACATTGCAGCAGCTGCAATGTACACCATAGTGACT
CCCATGTTGAACCCCTTTATCTATAGCCTAAGGAACAAGGACATGAAGGGGGCCCTAAAGAGGCTCTTCA
GTCACAGGAGTATTGTTTCCTCTTAG

Translation (311 aa):
MENQSSISEFFLRGISAPPEQQQSLFGIFLCMYLVTLTGNLLIILAIGSDLHLHTPMYFFLANLSFVDMG
LTSSTVTKMLVNIQTRHHTISYTGCLTQMYFFLMFGDLDSFFLAAMAYDRYVAICHPLCYSTVMRPQVCA
LMLALCWVLTNIVALTHTFLMARLSFCVTGEIAHFFCDITPVLKLSCSDTHINEMMVFVLGGTVLIVPFL
CIVTSYIHIVPAILRVRTRGGVGKAFSTCSSHLCVVCVFYGTLFSAYLCPPSIASEEKDIAAAAMYTIVT
PMLNPFIYSLRNKDMKGALKRLFSHRSIVSS


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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