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Report for CCDS35364.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35364.1 Public Homo sapiens X FAM199X 24 110 108 CCDS HistoryNCBI Gene:139231Re-query CCDS DB by CCDS ID:35364.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35364.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000493442.2 ENSP00000417581.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000493442.2Link to Ensembl Protein Viewer:ENSP00000417581.1Re-query CCDS DB by Nucleotide ID:ENST00000493442Re-query CCDS DB by Protein ID:ENSP00000417581
Original member Current member NCBI NM_207318.4 NP_997201.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207318.4Link to Protein Sequence:NP_997201.1Re-query CCDS DB by Nucleotide ID:NM_207318Re-query CCDS DB by Protein ID:NP_997201Link to BLAST:NP_997201.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997201.1 388 Q6PEV8-1 388 100% 0 0

Chromosomal Locations for CCDS 35364.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 104166786 104166982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 104175623 104175842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 104186066 104186215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 104186460 104186621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 104188040 104188306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 104189608 104189778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1167 nt):
ATGTCCGACGAGGCCTCGGCCATCACTTCCTACGAGAAGTTTCTAACCCCCGAGGAGCCCTTCCCACTCC
TGGGACCTCCTCGCGGGGTGGGCACCTGCCCGAGCGAGGAGCCGGGCTGCCTGGACATCAGCGACTTCGG
CTGCCAGCTGTCCTCCTGCCATCGCACCGACCCGCTCCACCGCTTCCACACCAACAGGTGGAACCTAACT
TCTTGTGGAACAAGTGTTGCCAGCTCAGAAGGCAGTGAGGAGCTGTTTTCATCTGTGTCTGTTGGAGATC
AAGATGATTGCTATTCCCTGTTAGATGATCAGGACTTCACTTCTTTTGATTTATTTCCTGAGGGGAGTGT
CTGCAGTGATGTCTCTTCTTCTATTAGCACTTACTGGGATTGGTCAGATAGCGAGTTTGAATGGCAGTTA
CCAGGCAGTGACATTGCCAGTGGGAGTGATGTACTTTCTGATGTCATACCCAGTATTCCAAGTTCACCTT
GCCTGCTTCCTAAAAAGAAAAACAAGCACCGGAATTTAGATGAACTCCCTTGGAGTGCAATGACAAATGA
TGAGCAGGTGGAATATATTGAGTATCTGAGTCGGAAAGTGAGTACTGAGATGGGTCTTCGGGAGCAACTT
GATATTATTAAGATCATTGATCCTTCTGCTCAAATCTCCCCTACAGACAGTGAGTTTATTATTGAACTTA
ACTGTCTCACAGATGAAAAACTGAAGCAGGTCAGAAACTATATCAAGGAACATAGCCCTCGCCAACGGCC
TGCAAGAGAGGCCTGGAAGAGAAGCAACTTTAGTTGTGCAAGCACCAGTGGAGTGAGCGGTGCCAGTGCC
AGCGCCAGCAGCAGCAGTGCCAGCATGGTCAGTTCTGCAAGCAGCAGTGGGTCCAGTGTTGGAAACTCTG
CTTCAAACTCCAGTGCCAACATGAGTCGAGCACACAGTGACAGCAACCTGTCTGCAAGTGCAGCAGAGCG
GATTCGGGATTCAAAAAAGCGATCCAAGCAGCGGAAGTTACAGCAGAAGGCCTTCCGCAAGAGGCAGCTG
AAGGAGCAGAGGCAGGCCCGGAAGGAGAGGCTCAGTGGGCTCTTCCTTAACGAAGAGGTGCTGTCCTTGA
AAGTGACTGAGGAAGACCATGAAGCAGATGTTGATGTTTTGATGTAA

Translation (388 aa):
MSDEASAITSYEKFLTPEEPFPLLGPPRGVGTCPSEEPGCLDISDFGCQLSSCHRTDPLHRFHTNRWNLT
SCGTSVASSEGSEELFSSVSVGDQDDCYSLLDDQDFTSFDLFPEGSVCSDVSSSISTYWDWSDSEFEWQL
PGSDIASGSDVLSDVIPSIPSSPCLLPKKKNKHRNLDELPWSAMTNDEQVEYIEYLSRKVSTEMGLREQL
DIIKIIDPSAQISPTDSEFIIELNCLTDEKLKQVRNYIKEHSPRQRPAREAWKRSNFSCASTSGVSGASA
SASSSSASMVSSASSSGSSVGNSASNSSANMSRAHSDSNLSASAAERIRDSKKRSKQRKLQQKAFRKRQL
KEQRQARKERLSGLFLNEEVLSLKVTEEDHEADVDVLM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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