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Report for CCDS13841.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13841.1 Public Homo sapiens 22 CRYBA4 24 110 108 CCDS HistoryNCBI Gene:1413Re-query CCDS DB by CCDS ID:13841.1See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 13841.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354760.4 ENSP00000346805.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000354760.4Link to Ensembl Protein Viewer:ENSP00000346805.3Re-query CCDS DB by Nucleotide ID:ENST00000354760Re-query CCDS DB by Protein ID:ENSP00000346805
Original member Current member NCBI NM_001886.3 NP_001877.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001886.3Link to Protein Sequence:NP_001877.1Re-query CCDS DB by Nucleotide ID:NM_001886Re-query CCDS DB by Protein ID:NP_001877Link to BLAST:NP_001877.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001877.1 196 P53673 196 100% 0 0

Chromosomal Locations for CCDS 13841.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 26622597 26622635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 26623234 26623352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 26625481 26625622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 26628288 26628430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 26630340 26630487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (591 nt):
ATGACCCTGCAATGCACAAAGTCAGCGGGACCCTGGAAGATGGTGGTGTGGGATGAGGACGGCTTCCAGG
GCCGGCGGCACGAGTTCACGGCCGAGTGCCCCAGCGTGCTGGAGCTTGGCTTCGAGACTGTGCGATCTTT
GAAAGTGCTGAGTGGAGCGTGGGTGGGCTTTGAGCATGCTGGCTTCCAAGGGCAGCAGTACATTCTGGAA
CGAGGCGAATATCCAAGCTGGGATGCCTGGGGCGGCAACACGGCCTACCCCGCCGAGAGGCTCACCTCCT
TCCGGCCTGCGGCCTGTGCTAACCACCGTGACTCGAGGCTGACAATCTTCGAGCAAGAGAACTTCCTGGG
CAAGAAAGGAGAGCTGAGCGATGACTATCCTTCCCTCCAGGCCATGGGATGGGAAGGCAATGAAGTAGGG
TCCTTCCACGTCCACTCTGGGGCCTGGGTTTGCTCCCAGTTTCCGGGCTACCGAGGATTTCAGTATGTGC
TGGAATGCGATCACCATTCCGGTGACTACAAACATTTCCGGGAGTGGGGCTCTCATGCCCCGACCTTCCA
GGTGCAGAGCATCCGCAGGATCCAGCAGTGA

Translation (196 aa):
MTLQCTKSAGPWKMVVWDEDGFQGRRHEFTAECPSVLELGFETVRSLKVLSGAWVGFEHAGFQGQQYILE
RGEYPSWDAWGGNTAYPAERLTSFRPAACANHRDSRLTIFEQENFLGKKGELSDDYPSLQAMGWEGNEVG
SFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWGSHAPTFQVQSIRRIQQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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