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Report for CCDS36463.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36463.1 Public Mus musculus 12 Pole2 23 108 98 CCDS HistoryNCBI Gene:18974Re-query CCDS DB by CCDS ID:36463.1Re-query CCDS DB by GeneID:18974See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 36463.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000021359.6 ENSMUSP00000021359.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000021359.6Link to Ensembl Protein Viewer:ENSMUSP00000021359.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000021359Re-query CCDS DB by Protein ID:ENSMUSP00000021359
Original member Current member NCBI NM_011133.2 NP_035263.1 Accepted alive Link to Nucleotide Sequence:NM_011133.2Link to Protein Sequence:NP_035263.1Re-query CCDS DB by Nucleotide ID:NM_011133Re-query CCDS DB by Protein ID:NP_035263Link to BLAST:NP_035263.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035263.1 527 O54956 527 100% 0 0

Chromosomal Locations for CCDS 36463.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 69201864 69201882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69202907 69202974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69204091 69204267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69206410 69206518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69207859 69207936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69208021 69208080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69208917 69208971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69209312 69209401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69209822 69209994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69211373 69211445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69212223 69212271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69212987 69213043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69213829 69213912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69215311 69215385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69221977 69222070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69222399 69222476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69223104 69223179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69226338 69226438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69228097 69228164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1584 nt):
ATGGCGCCGGAGCGGCTGCGGAGCCGCACGGTCTCAGCTTTCAAGCTGCGGGGCTTGCTGCTCAGGAGTG
AAGCCACCAAGTATCTGACTGAAGCTCTCCAGTCTGTCACTGAATTGGAGCTAGAGGAGAACCTAGGAAA
GATCATCGATGCAGTTGAAAAGCAGCCCTTGTCCTCGAACATGATCGAACGATCTGTCGTGGAGGCAGCT
GTGCAAGAGTGCAGTCAGTCTATGGATGAGACTATAGAGCACGTTTTCAATATCATTGGAGCTTTTGATA
TTCCACGTTTTATATATAATTCAGAAAGGAAAAAATTTCTTCCTCTATCCATGACTAATCATGCTGCACC
AACCTTATTTGGAACAGCAAGAGACAAAGCCGAGCTGTATCTTGAACGCTATACCATTTTACACCAGAGG
ACACACAGACATGAATTGTTCACTCCTCCGGTGATAGGCTCACACCTTGAAGAAAGTGGGAGCAAGTTCC
AGCTTAAAACTATAGAAACCTTACTGGGTAGCACAAGCAAAGTTGGTGACGTGATCGTCCTGGGGATGAT
AACCCAGCTGAAAGAGGGGAAGTTTTTCCTGGAAGATCCTACTGGAACAGTACAACTGGACCTTAGTAAA
GCTCAGTTCCACAGTGGCTTATACACCGAGGCCTGCTTCGTCCTGGCAGAAGGTTGGTTTGAAGATCAAG
TGTTTCACGCCAATGCCTTTGGATTTCCTCCCACTGAGCCCTCCAGCACCACAAGGGCGTACTATGGAAA
TATTAATTTTTTTGGAGGGCCTTCTAATGCATCAGTGAAGACGTATACAAAGCTGAGACAGCTGGAAGAT
GAGAACAAGGACGCCATGTTTGTGATTGTGTCTGATGTTTGGTTGGACCAAGTGCAAGTGTTGGAGAAGT
TTCATGTAATGTTTTCTGGTTACTCGCCAGCACCTCCAACCTGCTTTATTCTGTGTGGTAATTTTTCATC
TGCACCATATGGAAAAAATCAAGTCCAGGCTTTGAAAGATTCCCTAAAATCTTTGGCAGACATAATTTGT
GAATATCCAAGTATCCACCAAAGTAGCCGTTTTGTGTTTGTGCCTGGCCCAGAGGATCCTGGATTTGGTT
CCATTTTACCAAGGCCGCCACTCGCTGAAAGCATCACACAGGAATTCAGACAAAGGGTTCCGTTTTCAGT
TTTCACGACTAATCCTTGCAGAATTCAGTATTGTACACAAGAAATAATTATCTTCCGTGAAGACTTAGTG
AATAAAATGTGTAGAAACTGTGTCCGTTTTCCTAGCAGCAGTTTGGATATTCCTACTCACTTCGTAAAGA
CCATCTTATCTCAGGGACATCTGGCTCCTCTCCCTCTTTACGTATGCCCCGTCCACTGGGCATATGATTA
CACGTTGAGAGTGTACCCGGTGCCCGACCTGCTGGTCATTGCAGACAAGTACGACCCGTTCACCGTGACC
AACACCGATTGCCTCTGCATAAACCCTGGCTCCTTTCCAAGAAGTGGATTTGCATTCAAAGTTTTTTACC
CTTCCAGTAAAACAGTAGAAGACAGCAAACTTCAGGGCTTTTGA

Translation (527 aa):
MAPERLRSRTVSAFKLRGLLLRSEATKYLTEALQSVTELELEENLGKIIDAVEKQPLSSNMIERSVVEAA
VQECSQSMDETIEHVFNIIGAFDIPRFIYNSERKKFLPLSMTNHAAPTLFGTARDKAELYLERYTILHQR
THRHELFTPPVIGSHLEESGSKFQLKTIETLLGSTSKVGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSK
AQFHSGLYTEACFVLAEGWFEDQVFHANAFGFPPTEPSSTTRAYYGNINFFGGPSNASVKTYTKLRQLED
ENKDAMFVIVSDVWLDQVQVLEKFHVMFSGYSPAPPTCFILCGNFSSAPYGKNQVQALKDSLKSLADIIC
EYPSIHQSSRFVFVPGPEDPGFGSILPRPPLAESITQEFRQRVPFSVFTTNPCRIQYCTQEIIIFREDLV
NKMCRNCVRFPSSSLDIPTHFVKTILSQGHLAPLPLYVCPVHWAYDYTLRVYPVPDLLVIADKYDPFTVT
NTDCLCINPGSFPRSGFAFKVFYPSSKTVEDSKLQGF


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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