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Report for CCDS45100.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45100.1 Public Homo sapiens 14 DNAAF2 24 110 108 CCDS HistoryNCBI Gene:55172Re-query CCDS DB by CCDS ID:45100.1Re-query CCDS DB by GeneID:55172See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45100.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000406043.3 ENSP00000384862.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000406043.3Link to Ensembl Protein Viewer:ENSP00000384862.3Re-query CCDS DB by Nucleotide ID:ENST00000406043Re-query CCDS DB by Protein ID:ENSP00000384862
Original member Current member NCBI NM_001083908.2 NP_001077377.1 Accepted alive Link to Nucleotide Sequence:NM_001083908.2Link to Protein Sequence:NP_001077377.1Re-query CCDS DB by Nucleotide ID:NM_001083908Re-query CCDS DB by Protein ID:NP_001077377Link to BLAST:NP_001077377.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001077377.1 789 Q9NVR5-2 789 100% 0 0

Chromosomal Locations for CCDS 45100.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 49625542 49626048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 49633287 49635149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2370 nt):
ATGGCCAAAGCGGCGGCCTCCTCGTCGCTGGAGGACTTGGACCTGAGCGGAGAGGAGGTCCAGCGGCTCA
CCTCCGCCTTCCAGGACCCGGAGTTCCGGCGAATGTTCTCCCAGTACGCCGAGGAGCTCACCGACCCGGA
GAACCGGCGGCGCTACGAGGCGGAGATCACCGCGCTAGAGCGTGAGCGCGGGGTGGAAGTGCGGTTCGTG
CACCCGGAGCCCGGCCATGTGCTGCGCACCAGCCTGGACGGGGCGCGGCGCTGCTTTGTGAATGTCTGCA
GCAACGCGTTGGTGGGCGCGCCCAGCAGCCGGCCCGGCTCCGGTGGCGACCGGGGCGCAGCTCCTGGCAG
CCACTGGTCCCTGCCCTACAGCCTGGCGCCCGGCCGCGAGTACGCGGGGCGCAGCAGCAGCCGCTACATG
GTCTACGACGTGGTCTTCCATCCAGACGCGCTTGCGCTGGCCCGGCGGCACGAGGGCTTCCGCCAGATGC
TGGACGCCACGGCCCTGGAGGCCGTCGAGAAGCAGTTCGGCGTGAAGCTGGACCGCAGGAATGCCAAGAC
CCTGAAGGCCAAGTATAAGGGGACCCCAGAGGCTGCGGTGCTGCGCACGCCCCTGCCCGGGGTCATCCCC
GCAAGGCCTGACGGGGAGCCGAAGGGTCCTCTCCCGGACTTCCCCTACCCTTACCAGTACCCGGCAGCCC
CCGGGCCCCGGGCGCCCTCCCCTCCGGAAGCGGCCTTGCAGCCCGCCCCCACCGAGCCTCGCTACAGCGT
GGTGCAGCGCCACCACGTGGACCTCCAGGATTACCGCTGCTCCAGGGACTCAGCCCCGAGCCCCGTGCCC
CATGAGCTGGTGATCACCATCGAACTGCCGCTGTTGCGCTCGGCCGAGCAGGCGGCGCTGGAGGTAACGA
GAAAGCTGCTGTGCCTCGACTCGAGGAAACCTGACTACCGGCTGCGGCTCTCGCTCCCGTACCCAGTGGA
CGATGGCCGCGGCAAGGCACAATTCAACAAGGCCCGGCGGCAGCTGGTGGTTACGCTGCCAGTGGTGCTG
CCGGCCGCGCGCCGGGAGCCCGCTGTCGCCGTCGCCGCCGCCGCGCCGGAAGAGTCCGCGGACCGGTCCG
GAACTGACGGCCAGGCCTGCGCTTCCGCTCGCGAGGGGGAGGCGGGACCCGCGAGGAGTCGCGCGGAGGA
CGGAGGCCACGATACCTGCGTGGCTGGGGCTGCGGGCTCCGGGGTCACCACCCTGGGCGACCCGGAGGTG
GCGCCTCCGCCGGCCGCAGCTGGAGAGGAGCGTGTCCCCAAGCCGGGGGAGCAGGACTTGAGCAGGCACG
CGGGGTCACCGCCGGGCAGCGTGGAGGAGCCATCTCCTGGAGGAGAAAACTCACCTGGTGGCGGAGGCTC
CCCTTGTTTGTCCTCCCGGAGCCTGGCGTGGGGTTCTTCTGCGGGAAGAGAGAGTGCGCGCGGAGATAGC
AGTGTGGAAACACGCGAGGAGTCGGAGGGCACGGGCGGCCAGCGCTCAGCCTGCGCCATGGGTGGTCCCG
GGACCAAGAGCGGGGAGCCTTTGTGTCCTCCGTTACTGTGTAATCAGGACAAAGAAACCTTGACTCTGCT
CATTCAGGTGCCTCGGATCCAGCCGCAAAGTCTTCAAGGAGATTTGAATCCCCTCTGGTACAAATTACGC
TTCTCCGCACAAGACTTAGTTTATTCCTTCTTTTTGCAATTTGCTCCAGAGAATAAATTGAGTACCACAG
AACCTGTGATTAGCATTTCTTCAAACAATGCAGTGATAGAACTGGCAAAATCTCCAGAGAGCCATGGACA
TTGGAGAGAGTGGTATTATGGTGTAAACAACGATTCTTTGGAGTTGCAAGAATGTAGTAACTCTGATCAG
CTACAAGGAAAGGAGGAAAGAGTAAATGAAGAAAGTCATCTAACTGAAAAGGAATATATAGAACATTGTA
ACACCCCTACAACTGATTCTGATTCATCTATAGCAGTTAAAGCACTACAAATAGATAGCTTTGGTTTAGT
TACATGCTTTCAACAAGAGTCTCTTGATGTTTCTCAAATGATACTTGGAAAATCTCAGCAACCTGAGTCA
AAAATGCAATCTGAATTTATAAAAGAAAAAAGTGCTACTTGTTCAAATGAGGAAAAAGATAACTTAAACG
AGTCAGTAATAACTGAAGAGAAAGAAACAGATGGAGATCACCTATCTTCATTACTGAACAAAACTACGGT
TCACAATATACCTGGATTCGACAGCATAAAAGAAACCAATATGCAGGATGGTAGTGTGCAGGTCATTAAA
GATCATGTGACCAATTGTGCATTCAGTTTTCAGAATTCTTTGCTATATGATTTGGATTAA

Translation (789 aa):
MAKAAASSSLEDLDLSGEEVQRLTSAFQDPEFRRMFSQYAEELTDPENRRRYEAEITALERERGVEVRFV
HPEPGHVLRTSLDGARRCFVNVCSNALVGAPSSRPGSGGDRGAAPGSHWSLPYSLAPGREYAGRSSSRYM
VYDVVFHPDALALARRHEGFRQMLDATALEAVEKQFGVKLDRRNAKTLKAKYKGTPEAAVLRTPLPGVIP
ARPDGEPKGPLPDFPYPYQYPAAPGPRAPSPPEAALQPAPTEPRYSVVQRHHVDLQDYRCSRDSAPSPVP
HELVITIELPLLRSAEQAALEVTRKLLCLDSRKPDYRLRLSLPYPVDDGRGKAQFNKARRQLVVTLPVVL
PAARREPAVAVAAAAPEESADRSGTDGQACASAREGEAGPARSRAEDGGHDTCVAGAAGSGVTTLGDPEV
APPPAAAGEERVPKPGEQDLSRHAGSPPGSVEEPSPGGENSPGGGGSPCLSSRSLAWGSSAGRESARGDS
SVETREESEGTGGQRSACAMGGPGTKSGEPLCPPLLCNQDKETLTLLIQVPRIQPQSLQGDLNPLWYKLR
FSAQDLVYSFFLQFAPENKLSTTEPVISISSNNAVIELAKSPESHGHWREWYYGVNNDSLELQECSNSDQ
LQGKEERVNEESHLTEKEYIEHCNTPTTDSDSSIAVKALQIDSFGLVTCFQQESLDVSQMILGKSQQPES
KMQSEFIKEKSATCSNEEKDNLNESVITEEKETDGDHLSSLLNKTTVHNIPGFDSIKETNMQDGSVQVIK
DHVTNCAFSFQNSLLYDLD


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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