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Report for CCDS45365.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45365.1 Public Homo sapiens 16 PRR35 24 110 108 CCDS HistoryNCBI Gene:146325Re-query CCDS DB by CCDS ID:45365.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45365.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409413.4 ENSP00000386499.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000409413.4Link to Ensembl Protein Viewer:ENSP00000386499.3Re-query CCDS DB by Nucleotide ID:ENST00000409413Re-query CCDS DB by Protein ID:ENSP00000386499
Original member Current member NCBI NM_145270.3 NP_660313.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145270.3Link to Protein Sequence:NP_660313.1Re-query CCDS DB by Nucleotide ID:NM_145270Re-query CCDS DB by Protein ID:NP_660313Link to BLAST:NP_660313.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_660313.1 571 P0CG20 571 100% 0 0

Chromosomal Locations for CCDS 45365.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 563295 564376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 564674 565307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1716 nt):
ATGTCGCGGGAGGCGGGCTCATGCCGCGTGGGCACAGGGGCGAGGGCGCGGTCTCGGAAGCCCAAGAAGC
CA
CACTACATCCCGCGGCCCTGGGGCAAACCCTACAACTACAAATGCTTCCAGTGCCCCTTCACCTGCCT
G
GAGAAGTCACACCTCTACAACCACATGAAGTACAGCCTCTGCAAGGACTCCCTGTCCCTGCTGCTAGAC
TCC
CCAGACTGGGCGTGCCGCCGTGGCTCCACCACGCCTAGGCCCCACGCACCCACCCCAGACCGCCCTG
GG
GAGTCCGACCCCGGCAGGCAACCCCAGGGAGCACGGCCCACAGGTGCTGCCCCCGCGCCTGACCTCGT
G
GTCGCCGACATCCACTCCCTGCACTGTGGCGGAGGCCCCAAGTCCAGGGCCAAGGGGTCCCCAGGGCCA
CCA
CCCCCTGTGGCTAGGGCCACCCGGAAGGGTCCCGGCCCCAGTGGGCTCCTGCCTGAGTCGTGGAAGC
CG
GGGATGGGAGGGGACCCAAGGGGCGTGGGTGCGGGGGACATGGCCTCAGCAGGCCCTGAGGGCAGCGT
C
CCCTGCTATCCCCCGCCTGCCCCAGGGGAGTTCCCTGAGGCCCACAGCCTCCACCTGTCTCTGCTGGGC
GTC
AACTACCCGCTCAGCCCCGGCCTCTTCTCCTACTTGGGGCCCTCACTGGCCGCTGCAGCCCATGTGC
CC
TTCCTGGCCTCGGCCAGCCCCCTGCTGCCCCCGGCCACGGCCTTCCCAGCCGTGCAGCCCCCTCAGCG
C
CCCACCCCGGCCCCCCGCCTGTACTACCCGCTGCTTCTGGAGCACACTCTGGGGCTGCCAGCAGGCAAA
GCT
GCCCTTGCCAAGGCCCCTGTCTCCCCCAGGAGCCCCTCTGGGACTCCGGCTCCTGGCCTGCTGAAGG
TG
CCAGTTCCAGGGCTGGGGCCCTGGCCCCGAGTCACCCCCAGGGACCCAGGGCAGGAGGGGGAGCTGGA
G
CGGGCAGCCCAGAGTGACCCCAGGAGGAGGCTGTCCCTGGGAAGCAGGCTGGAGCTTCCGAAGGCATCC
CCC
AGCCTGACAAGGTTCTGTTCCCGGAGCAGCCTGCCCACCGGCTCCTCTGTGATGCTGTGGCCTGAGG
AC
GGGGATCCAGGCGGCCCTGAGACCCCCGGCCCTGAGGGCCCCCTCCCCCTGCAGCCACGGGGCCCAGT
G
CCAGGAAGCCCGGAGCATGTGGGCGAGGACCTGACCCGAGCCCTCGGTGACTACGCCAGGGTGGAGCAG
CGC
CTGGGACAGTTGGGGCCCGCGGGGGGCCTGGCCCCGAGACCCCTGCGGGAGCAGCTGGGCAAGATCC
GC
CTGGAGCTGCTCACCATTCACCAGGCGCTGGAGCAGGCCGTGAGGCCGCCAGACGCACCCCTCGACCT
C
TCTGTGAAACGTGCGCCCGCCAAGGGGCCCCAGGCTCTTGGAGAGGCGTGGGGGCGGCCCGAGCTGGGT
CCC
GTGTTGACCGGGGGCACCCCCGAGCCACCCGGCATGCTGGGCCCTGCAGCGCCCCAACCCTTCTCTG
GC
CACACCACCAAGTGTGAGGCCGACTCCAGCGTCCCACCCCCAGGGCTCCCCCTCGCAGCCCCAGATGA
C
CCTGTCATTCCTGGCAGTGGCTGGGGCACCTGTGTTGCGACGAGGAGTTCCCAGACCCCTGAGGCTGTC
TGT
GGCCTGCAGAGCCCCCAGGGCGCCGAGGTCTGA


Translation (571 aa):
MSREAGSCRVGTGARARSRKPKKPHYIPRPWGKPYNYKCFQCPFTCLEKSHLYNHMKYSLCKDSLSLLLD
S
PDWACRRGSTTPRPHAPTPDRPGESDPGRQPQGARPTGAAPAPDLVVADIHSLHCGGGPKSRAKGSPGP
P
PPVARATRKGPGPSGLLPESWKPGMGGDPRGVGAGDMASAGPEGSVPCYPPPAPGEFPEAHSLHLSLLG
V
NYPLSPGLFSYLGPSLAAAAHVPFLASASPLLPPATAFPAVQPPQRPTPAPRLYYPLLLEHTLGLPAGK
A
ALAKAPVSPRSPSGTPAPGLLKVPVPGLGPWPRVTPRDPGQEGELERAAQSDPRRRLSLGSRLELPKAS
P
SLTRFCSRS
SLPTGSSVMLWPEDGDPGGPETPGPEGPLPLQPRGPVPGSPEHVGEDLTRALGDYARVEQ
R
LGQLGPAGGLAPRPLREQLGKIRLELLTIHQALEQAVRPPDAPLDLSVKRAPAKGPQALGEAWGRPELG
P
VLTGGTPEPPGMLGPAAPQPFSGHTTKCEADSSVPPPGLPLAAPDDPVIPGSGWGTCVATRSSQTPEAV
C
GLQSPQGAEV




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 Genome Browser Links:   Ensembl Genome Browser
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