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Report for CCDS82386.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82386.1 Public Homo sapiens 19 SPACA6 24 110 108 CCDS HistoryNCBI Gene:147650Re-query CCDS DB by CCDS ID:82386.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82386.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000637797.2 ENSP00000490829.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000637797.2Link to Ensembl Protein Viewer:ENSP00000490829.1Re-query CCDS DB by Nucleotide ID:ENST00000637797Re-query CCDS DB by Protein ID:ENSP00000490829
Original member Current member NCBI NM_001316972.2 NP_001303901.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001316972.2Link to Protein Sequence:NP_001303901.1Re-query CCDS DB by Nucleotide ID:NM_001316972Re-query CCDS DB by Protein ID:NP_001303901Link to BLAST:NP_001303901.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001303901.1 324 W5XKT8-1 324 100% 0 0

Chromosomal Locations for CCDS 82386.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 51693527 51693740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51694478 51694555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51701658 51701726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51702629 51702652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51703021 51703098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51703228 51703337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51704030 51704186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51704270 51704480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51705090 51705123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (975 nt):
ATGGCCCTGCTGGCTCTGGCCAGTGCCGTCCCGTCTGCCCTGCTGGCCCTGGCTGTCTTCAGGGTGCCCG
CCTGGGCCTGTCTCCTCTGCTTCACAACCTACTCTGAGCGCCTCCGCATCTGCCAGATGTTTGTTGGGAT
GCGGAGCCCCAAGCTTGAAGAGTGTGAGGAGGCCTTCACGGCCGCCTTCCAGGGCCTCTCTGACACCGAA
ATCAACTATGATGAGAGAAGCCACCTGCATGACACCTTCACCCAGATGACCCATGCCCTGCAGGAGCTGG
CTGCTGCCCAGGGATCCTTTGAGGTTGCCTTCCCTGATGCTGCGGAGAAAATGAAGAAGGTCATTACACA
GCTTAAAGAAGCCCAGGCTTGCATCCCTCCCTGCGGTCTCCAGGAGTTCGCCCGGCGTTTCCTCTGCAGC
GGGTGCTACTCTAGGGTCTGCGACCTCCCGCTGGACTGCCCAGTTCAGGATGTGACAGTGACTCGGGGCG
ACCAGGCTATGTTTTCTTGCATCGTAAACTTCCAGCTGCCAAAGGAGGAGATCACCTATTCCTGGAAGTT
CGCAGGAGGAGGTCTCCGGACTCAGGACTTGTCCTATTTCCGAGATATGCCGCGGGCCGAAGGATACCTG
GCGCGGATCCGGCCGGCTCAGCTCACGCACCGCGGGACGTTCTCCTGCGTGATCAAGCAAGACCAGCGCC
CCCTGGCCCGGCTCTACTTCTTTCTTAACGTGACGGGCCCGCCCCCGCGGGCGGAGACAGAGTTGCAGGC
CTCGTTCCGGGAAGTGCTGCGCTGGGCGCCGCGGGATGCCGAGCTGATCGAGCCCTGGAGGCCCAGCCTG
GGCGAGCTGCTGGCCAGGCCCGAGGCTCTGACGCCCAGCAATCTGTTCCTGCTTGCAGTCCTCGGGGCCC
TCGCATCAGCGAGTGCGACAGTGTTGGCGTGGATGTTCTTTCGATGGTACTGCAGTGGCAACTAA

Translation (324 aa):
MALLALASAVPSALLALAVFRVPAWACLLCFTTYSERLRICQMFVGMRSPKLEECEEAFTAAFQGLSDTE
INYDERSHLHDTFTQMTHALQELAAAQGSFEVAFPDAAEKMKKVITQLKEAQACIPPCGLQEFARRFLCS
GCYSRVCDLPLDCPVQDVTVTRGDQAMFSCIVNFQLPKEEITYSWKFAGGGLRTQDLSYFRDMPRAEGYL
ARIRPAQLTHRGTFSCVIKQDQRPLARLYFFLNVTGPPPRAETELQASFREVLRWAPRDAELIEPWRPSL
GELLARPEALTPSNLFLLAVLGALASASATVLAWMFFRWYCSGN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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