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Report for CCDS12405.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12405.1 Public Homo sapiens 19 CILP2 24 110 108 CCDS HistoryNCBI Gene:148113Re-query CCDS DB by CCDS ID:12405.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12405.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000291495.5 ENSP00000291495.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000291495.5Link to Ensembl Protein Viewer:ENSP00000291495.3Re-query CCDS DB by Nucleotide ID:ENST00000291495Re-query CCDS DB by Protein ID:ENSP00000291495
Original member Current member NCBI NM_153221.2 NP_694953.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153221.2Link to Protein Sequence:NP_694953.2Re-query CCDS DB by Nucleotide ID:NM_153221Re-query CCDS DB by Protein ID:NP_694953Link to BLAST:NP_694953.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694953.2 1156 Q8IUL8 1156 100% 0 0

Chromosomal Locations for CCDS 12405.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 19538350 19538413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19539679 19539777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19540204 19540476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19541091 19541246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19542375 19542650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19542864 19542972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19543248 19543405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19543681 19546016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3471 nt):
ATGGCGTCGCTGCTGCCACTGCTCTGTCTCTGTGTCGTCGCTGCGCACCTGGCGGGGGCCCGAGACGCCA
CCCCCACCGAGGAGCCAATGGCGACTGCACTGGGCCTGGAAAGACGGTCCGTGTACACCGGCCAGCCCTC
ACCAGCCCTGGAGGACTGGGAAGAGGCCAGCGAGTGGACGTCCTGGTTCAACGTGGACCACCCCGGAGGC
GACGGCGACTTCGAGAGCCTGGCTGCCATCCGCTTCTACTACGGGCCAGCGCGCGTGTGCCCGCGACCGC
TGGCGCTGGAAGCGCGCACCACGGACTGGGCCCTGCCGTCCGCCGTCGGCGAGCGCGTGCACTTGAACCC
CACGCGCGGCTTCTGGTGCCTCAACCGCGAGCAACCGCGTGGCCGCCGCTGCTCCAACTACCACGTGCGC
TTCCGCTGCCCACTAGAAGCCTCGTGGGGCGCGTGGGGCCCGTGGGGTCCCTGCTCGGGGAGCTGTGGGC
CAGGCCGTCGCTTGCGCCGCCGCCACTGCCCAAGCCCCGCTGGGGATGCGTGTCCCGGGCGTCCTCTGGA
GGCGCAGAAGTGCGTGCGGCCTCGGTGTCCAGGGTGCAGCCTTGACACCTGTGAATGCCCGGACCACATC
CTCCTGGGCTCGGTGGTCACCCCATCTGGGCAACCACTGCTAGGAGCCAGGGTCTCCCTGCGAGACCAGC
CTGGCACTGTGGCCACCAGCGATGCTCACGGAACCTTCCGGGTGCCTGGTGTCTGTGCTGACAGCCGCGC
CAACATCAGGGCCCAGATGGATGGCTTCTCTGCAGGGGAGGCCCAGGCCCAGGCCAACGGATCCATCTCT
GTGGTCACCATCATCCTTGATAAGTTGGAGAAGCCGTACCTGGTGAAACACCCTGAGTCCCGAGTGCGAG
AGGCTGGCCAGAATGTGACTTTCTGCTGCAAAGCCTCCGGGACCCCCATGCCCAAGAAATACTCCTGGTT
CCACAATGGGACCCTGCTGGACAGGCGAGCTCATGGGTACGGGGCCCACCTGGAGCTGCGGGGACTGCGC
CCAGACCAGGCTGGCATCTACCACTGCAAGGCATGGAATGAGGCGGGTGCCGTGCGCTCGGGCACTGCCC
GGCTCACTGTACTTGCCCCAGGCCAGCCAGCCTGCGACCCCCGGCCCCGAGAGTACCTGATCAAGCTCCC
TGAGGACTGTGGTCAGCCAGGTAGTGGCCCTGCCTACCTGGATGTGGGCCTCTGTCCCGACACCCGCTGC
CCCAGCCTGGCAGGCTCCAGCCCCCGCTGCGGGGACGCCAGCTCCCGCTGCTGCTCTGTGCGCCGTCTGG
AGAGAAGGGAGATTCACTGCCCTGGCTACGTCCTCCCAGTGAAGGTGGTGGCAGAGTGTGGCTGCCAGAA
GTGTCTGCCCCCTCGGGGGCTGGTCCGGGGCCGTGTTGTGGCTGCTGACTCCGGGGAGCCGCTACGCTTC
GCCAGGATTCTGCTGGGCCAGGAGCCCATCGGCTTCACCGCCTACCAGGGCGACTTTACCATTGAGGTGC
CGCCCTCCACCCAGCGGCTGGTGGTGACTTTTGTGGACCCCAGCGGTGAGTTCATGGACGCTGTCCGGGT
CTTGCCTTTTGATCCTCGAGGTGCCGGCGTGTACCACGAGGTCAAGGCCATGCGGAAGAAAGCCCCGGTC
ATTTTACATACCAGCCAGAGCAACACGATCCCCCTGGGCGAGCTGGAAGATGAGGCGCCCCTGGGCGAGC
TGGTCCTGCCTTCTGGCGCTTTCCGCAGAGCCGACGGCAAACCCTACTCGGGGCCTGTGGAGGCCCGGGT
GACGTTCGTGGACCCCCGAGACCTCACCTCGGCGGCGTCTGCCCCCAGTGACCTGCGCTTCGTGGACAGC
GACGGCGAGCTGGCTCCACTGCGCACCTACGGCATGTTCTCCGTGGACCTCCGTGCGCCCGGCTCCGCGG
AGCAGCTGCAGGTGGGGCCGGTGGCCGTGCGGGTGGCCGCCAGCCAGATCCACATGCCAGGCCACGTGGA
GGCCCTCAAGCTGTGGTCGCTGAACCCCGAGACCGGCTTGTGGGAGGAGGAGAGCGGCTTCCGGCGCGAG
GGGTCCTCGGGCCCCCGGGTGCGCCGGGAGGAGCGCGTCTTCCTGGTGGGCAACGTGGAGATCCGGGAGC
GGCGCCTGTTCAATCTGGACGTGCCTGAGCGCCGCCGCTGCTTCGTGAAGGTGCGCGCCTACGCCAACGA
CAAGTTCACCCCCAGCGAGCAGGTGGAGGGCGTGGTGGTCACGCTGGTCAATCTGGAGCCCGCCCCCGGC
TTCTCCGCCAACCCCCGTGCCTGGGGCCGCTTTGACAGCGCGGTCACCGGCCCCAATGGCGCCTGCCTCC
CCGCCTTCTGCGACGCCGACAGGCCAGACGCCTACACCGCCCTGGTCACCGCCACCCTGGGCGGCGAGGA
GCTGGAGCCGGCCCCTTCCTTGCCCCGCCCACTCCCGGCCACCGTGGGCGTCACCCAGCCCTACCTGGAC
AGGCTGGGGTACCGTCGGACGGACCACGACGATCCCGCCTTCAAGCGTAACGGCTTCCGCATCAACCTCG
CCAAGCCCAGGCCAGGTGACCCCGCCGAGGCCAATGGGCCTGTGTACCCGTGGCGCAGCCTGCGGGAATG
CCAGGGGGCCCCGGTGACTGCCAGCCACTTCCGCTTCGCCAGGGTGGAGGCGGACAAGTACGAGTACAAC
GTGGTCCCCTTCCGAGAGGGCACACCTGCCTCCTGGACTGGCGATCTCCTGGCCTGGTGGCCCAACCCGC
AGGAGTTCCGGGCCTGCTTCCTCAAGGTGAAGATCCAGGGTCCCCAGGAGTATATGGTCCGCTCCCACAA
CGCAGGGGGCAGCCACCCACGCACCCGCGGCCAGCTCTACGGACTTCGGGATGCCCGGAGTGTGCGAGAC
CCCGAGCGTCCGGGCACCTCGGCAGCCTGCGTGGAGTTCAAGTGCAGCGGGATGCTGTTCGACCAGCGGC
AGGTGGACAGGACGCTGGTGACCATTATGCCCCAGGGCAGCTGCCGGCGCGTGGCCGTCAACGGACTCCT
TCGGGATTACCTGACCCGGCACCCCCCACCGGTGCCCGCGGAGGACCCAGCTGCCTTCTCCATGCTGGCC
CCCCTAGACCCTCTGGGCCACAACTATGGCGTCTACACTGTCACTGACCAGAGCCCACGCTTGGCCAAGG
AGATCGCCATTGGCCGCTGCTTTGATGGTTCCTCTGACGGCTTCTCCAGAGAGATGAAGGCTGATGCCGG
CACAGCCGTCACCTTCCAGTGCCGGGAGCCACCGGCCGGACGACCCAGCCTCTTCCAGAGGCTGCTGGAG
TCCCCGGCGACAGCACTTGGTGACATCCGCAGGGAGATGAGCGAGGCGGCGCAGGCACAGGCCCGGGCCT
CAGGTCCCCTCCGCACCCGCCGGGGTAGGGTCCGGCAGTGA

Translation (1156 aa):
MASLLPLLCLCVVAAHLAGARDATPTEEPMATALGLERRSVYTGQPSPALEDWEEASEWTSWFNVDHPGG
DGDFESLAAIRFYYGPARVCPRPLALEARTTDWALPSAVGERVHLNPTRGFWCLNREQPRGRRCSNYHVR
FRCPLEASWGAWGPWGPCSGSCGPGRRLRRRHCPSPAGDACPGRPLEAQKCVRPRCPGCSLDTCECPDHI
LLGSVVTPSGQPLLGARVSLRDQPGTVATSDAHGTFRVPGVCADSRANIRAQMDGFSAGEAQAQANGSIS
VVTIILDKLEKPYLVKHPESRVREAGQNVTFCCKASGTPMPKKYSWFHNGTLLDRRAHGYGAHLELRGLR
PDQAGIYHCKAWNEAGAVRSGTARLTVLAPGQPACDPRPREYLIKLPEDCGQPGSGPAYLDVGLCPDTRC
PSLAGSSPRCGDASSRCCSVRRLERREIHCPGYVLPVKVVAECGCQKCLPPRGLVRGRVVAADSGEPLRF
ARILLGQEPIGFTAYQGDFTIEVPPSTQRLVVTFVDPSGEFMDAVRVLPFDPRGAGVYHEVKAMRKKAPV
ILHTSQSNTIPLGELEDEAPLGELVLPSGAFRRADGKPYSGPVEARVTFVDPRDLTSAASAPSDLRFVDS
DGELAPLRTYGMFSVDLRAPGSAEQLQVGPVAVRVAASQIHMPGHVEALKLWSLNPETGLWEEESGFRRE
GSSGPRVRREERVFLVGNVEIRERRLFNLDVPERRRCFVKVRAYANDKFTPSEQVEGVVVTLVNLEPAPG
FSANPRAWGRFDSAVTGPNGACLPAFCDADRPDAYTALVTATLGGEELEPAPSLPRPLPATVGVTQPYLD
RLGYRRTDHDDPAFKRNGFRINLAKPRPGDPAEANGPVYPWRSLRECQGAPVTASHFRFARVEADKYEYN
VVPFREGTPASWTGDLLAWWPNPQEFRACFLKVKIQGPQEYMVRSHNAGGSHPRTRGQLYGLRDARSVRD
PERPGTSAACVEFKCSGMLFDQRQVDRTLVTIMPQGSCRRVAVNGLLRDYLTRHPPPVPAEDPAAFSMLA
PLDPLGHNYGVYTVTDQSPRLAKEIAIGRCFDGSSDGFSREMKADAGTAVTFQCREPPAGRPSLFQRLLE
SPATALGDIRREMSEAAQAQARASGPLRTRRGRVRQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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