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Report for CCDS44133.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44133.1 Public Homo sapiens 1 KNCN 24 110 108 CCDS HistoryNCBI Gene:148930Re-query CCDS DB by CCDS ID:44133.1Re-query CCDS DB by GeneID:148930See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44133.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396314.3 ENSP00000379607.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396314.3Link to Ensembl Protein Viewer:ENSP00000379607.3Re-query CCDS DB by Nucleotide ID:ENST00000396314Re-query CCDS DB by Protein ID:ENSP00000379607
Original member Current member NCBI NM_001097611.1 NP_001091080.1 Accepted alive Link to Nucleotide Sequence:NM_001097611.1Link to Protein Sequence:NP_001091080.1Re-query CCDS DB by Nucleotide ID:NM_001097611Re-query CCDS DB by Protein ID:NP_001091080Link to BLAST:NP_001091080.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001091080.1 101 A6PVL3-2 101 100% 0 0

Chromosomal Locations for CCDS 44133.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 46547730 46547809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 46549193 46549267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 46551065 46551215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (306 nt):
ATGGACATCCCCATCAGCAGCAGAGACTTCCGCGGCCTGCAGCTGGCCTGCGTGGCTCTCGGGCTGGTGG
CTGGCAGCATCATTATCGGCATCTCCGTATCCAAGGCTGCAGCTGCCATGGGCGGTGTCTTTATTGGCGC
TGCTGTTCTGGGGAGCCTAAGAATCCATCCCCATCCAGGGGCAGACCACGGGGAAGGAAGATCCAGCACC
AATGGCAACAAGGAAGGAGCCCGCAGCAGCCTGTCCACCGTGAGCAGGACCCTGGAGAAGCTGAAGCCGG
GGACCCGGGGGGCTGAGGAATGCTGA

Translation (101 aa):
MDIPISSRDFRGLQLACVALGLVAGSIIIGISVSKAAAAMGGVFIGAAVLGSLRIHPHPGADHGEGRSST
NGNKEGARSSLSTVSRTLEKLKPGTRGAEEC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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