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Report for CCDS51964.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51964.1 Public Mus musculus 7 Myadm 23 108 98 CCDS HistoryNCBI Gene:50918Re-query CCDS DB by CCDS ID:51964.1Re-query CCDS DB by GeneID:50918See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51964.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000096744.7 ENSMUSP00000094505.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000096744.7Link to Ensembl Protein Viewer:ENSMUSP00000094505.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000096744Re-query CCDS DB by Protein ID:ENSMUSP00000094505
Original member Current member EBI ENSMUST00000164553.6 ENSMUSP00000131318.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000164553.6Link to Ensembl Protein Viewer:ENSMUSP00000131318.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000164553Re-query CCDS DB by Protein ID:ENSMUSP00000131318
Original member Current member EBI ENSMUST00000203328.2 ENSMUSP00000144984.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000203328.2Link to Ensembl Protein Viewer:ENSMUSP00000144984.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000203328Re-query CCDS DB by Protein ID:ENSMUSP00000144984
Original member Current member EBI ENSMUST00000203566.2 ENSMUSP00000145120.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000203566.2Link to Ensembl Protein Viewer:ENSMUSP00000145120.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000203566Re-query CCDS DB by Protein ID:ENSMUSP00000145120
Original member Current member NCBI NM_001093764.1 NP_001087233.1 Accepted alive Link to Nucleotide Sequence:NM_001093764.1Link to Protein Sequence:NP_001087233.1Re-query CCDS DB by Nucleotide ID:NM_001093764Re-query CCDS DB by Protein ID:NP_001087233Link to BLAST:NP_001087233.1
Original member Current member NCBI NM_001093765.1 NP_001087234.1 Accepted alive Link to Nucleotide Sequence:NM_001093765.1Link to Protein Sequence:NP_001087234.1Re-query CCDS DB by Nucleotide ID:NM_001093765Re-query CCDS DB by Protein ID:NP_001087234Link to BLAST:NP_001087234.1
Original member Current member NCBI NM_001093766.1 NP_001087235.1 Accepted alive Link to Nucleotide Sequence:NM_001093766.1Link to Protein Sequence:NP_001087235.1Re-query CCDS DB by Nucleotide ID:NM_001093766Re-query CCDS DB by Protein ID:NP_001087235Link to BLAST:NP_001087235.1
Original member Current member NCBI NM_016969.2 NP_058665.2 Accepted alive Link to Nucleotide Sequence:NM_016969.2Link to Protein Sequence:NP_058665.2Re-query CCDS DB by Nucleotide ID:NM_016969Re-query CCDS DB by Protein ID:NP_058665Link to BLAST:NP_058665.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001087233.1 320 O35682 320 100% 0 0
NP_001087234.1 320 O35682 320 100% 0 0
NP_001087235.1 320 O35682 320 100% 0 0
NP_058665.2 320 O35682 320 100% 0 0

Chromosomal Locations for CCDS 51964.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 3296724 3297686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (963 nt):
ATGCCGGTAACAGTAACTCGTACAACCATCACGACTACAACGTCATCCTCCACCACTGTGGGGTCCGCTC
GGGCGCTGACCCAGCCGCTGGGCCTCCTCCGCCTCCTGCAGCTAATATCCACCTGTGTGGCTTTCTCGCT
GGTGGCCAGTGTGGGTGCCTGGACAGGGCCCATGGGTAACTGGGCCATGTTCACCTGGTGTTTCTGCTTT
GCTGTTACCCTCATCATCCTGATTGTGGAGTTAGGTGGACTCCAGGCCCACTTCCCCCTGTCATGGCGAA
ACTTCCCCATCACCTTTGCCTGCTACGCGGCCCTCTTCTGCCTGTCGTCTTCCATCATCTATCCCACCAC
CTATGTGCAGTTCCTAGCTCATGGACGTACCCGGGACCATGCCATCGCTGCCACCACTTTCTCCTGCGTT
GCCTGTTTGGCGTATGCCACTGAAGTGGCCTGGACCCGTGCAAGGCCCGGTGAGATCACTGGCTATATGG
CTACCGTGCCAGGGCTGCTCAAAGTTTTTGAGACCTTCGTAGCCTGTATCATCTTTGCCTTCATCAGTGA
GCCGCTCCTGTATAATCAGAAGCCAGCCCTGGAGTGGTGTGTGGCAGTCTATGCCATCTGCTTCATACTA
GCAGGGGTGACCATCCTGCTCAACCTGGGGGATTGTACCAACGTGTTGCCCATCCCTTTCCCCACCTTCC
TCTCAGGCTTGGCCTTACTCTCTGTTCTCTTTTACGCCACTGCCATCGTCCTCTGGCCCCTCTACCAATT
TGATCAGAGATATCAGGGCCAACCCCGCCGTTCAATGGATCCAAGCTGCACTCGTAGTATTAGTTATATA
CAACCCAACACGGTGTGTTTCTGGGACCGACGACTGGCGGTGTCCATCCTGACAGGTATCAACCTGCTGG
CATATGTGTCTGATCTGGTGTACTCCACTCGTCTGGTGTTCGTCAAGGTCTGA

Translation (320 aa):
MPVTVTRTTITTTTSSSTTVGSARALTQPLGLLRLLQLISTCVAFSLVASVGAWTGPMGNWAMFTWCFCF
AVTLIILIVELGGLQAHFPLSWRNFPITFACYAALFCLSSSIIYPTTYVQFLAHGRTRDHAIAATTFSCV
ACLAYATEVAWTRARPGEITGYMATVPGLLKVFETFVACIIFAFISEPLLYNQKPALEWCVAVYAICFIL
AGVTILLNLGDCTNVLPIPFPTFLSGLALLSVLFYATAIVLWPLYQFDQRYQGQPRRSMDPSCTRSISYI
QPNTVCFWDRRLAVSILTGINLLAYVSDLVYSTRLVFVKV


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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