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Report for CCDS459.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
459.1 Public Homo sapiens 1 CTPS1 24 110 108 CCDS HistoryNCBI Gene:1503Re-query CCDS DB by CCDS ID:459.1Re-query CCDS DB by GeneID:1503See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 459.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372616.1 ENSP00000361699.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372616.1Link to Ensembl Protein Viewer:ENSP00000361699.1Re-query CCDS DB by Nucleotide ID:ENST00000372616Re-query CCDS DB by Protein ID:ENSP00000361699
Original member Current member EBI ENST00000650070.2 ENSP00000497602.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000650070.2Link to Ensembl Protein Viewer:ENSP00000497602.1Re-query CCDS DB by Nucleotide ID:ENST00000650070Re-query CCDS DB by Protein ID:ENSP00000497602
Original member Current member EBI ENST00000649124.2 ENSP00000497744.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000649124.2Link to Ensembl Protein Viewer:ENSP00000497744.1Re-query CCDS DB by Nucleotide ID:ENST00000649124Re-query CCDS DB by Protein ID:ENSP00000497744
Original member Current member EBI ENST00000470271.6 ENSP00000497901.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000470271.6Link to Ensembl Protein Viewer:ENSP00000497901.2Re-query CCDS DB by Nucleotide ID:ENST00000470271Re-query CCDS DB by Protein ID:ENSP00000497901
Original member Current member NCBI NM_001905.4 NP_001896.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001905.4Link to Protein Sequence:NP_001896.2Re-query CCDS DB by Nucleotide ID:NM_001905Re-query CCDS DB by Protein ID:NP_001896Link to BLAST:NP_001896.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001896.2 591 P17812-1 591 100% 0 0

Chromosomal Locations for CCDS 459.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 40983291 40983456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 40984821 40984991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 40987372 40987472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 40988594 40988710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 40991165 40991248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 40991765 40991845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 40995917 40996068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 40997394 40997526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 41001029 41001117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 41002160 41002254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 41003114 41003176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 41006051 41006094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 41007449 41007545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 41008659 41008714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 41008794 41008890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 41009445 41009589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 41010161 41010245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1776 nt):
ATGAAGTACATTCTGGTTACTGGTGGTGTTATATCAGGAATTGGAAAAGGAATCATTGCCAGCAGTGTGG
GCACAATACTCAAGTCATGTGGTTTACATGTAACTTCAATCAAAATTGACCCCTACATTAACATTGATGC
AGGAACATTCTCTCCTTATGAGCATGGTGAGGTTTTTGTGCTGGATGATGGTGGGGAAGTAGACCTTGAC
CTGGGTAACTATGAGCGGTTCCTTGACATCCGCCTCACCAAGGACAATAATCTGACCACTGGAAAGATAT
ACCAGTATGTCATTAACAAGGAACGGAAAGGAGATTACTTGGGGAAAACTGTCCAAGTTGTCCCTCATAT
CACAGATGCAATCCAGGAGTGGGTGATGAGACAGGCGTTAATACCTGTAGATGAAGATGGCCTGGAACCT
CAAGTGTGTGTTATTGAGCTTGGTGGAACCGTGGGGGACATAGAAAGCATGCCCTTTATTGAGGCCTTCC
GTCAGTTCCAATTCAAGGTCAAAAGAGAGAACTTTTGTAACATCCACGTCAGTCTAGTTCCCCAGCCAAG
TTCAACAGGGGAACAGAAGACTAAACCTACCCAGAATAGTGTTCGGGAACTTAGAGGACTTGGGCTTTCC
CCAGATCTGGTTGTATGCAGGTGCTCAAATCCACTTGACACATCAGTGAAGGAGAAAATATCAATGTTCT
GCCATGTTGAGCCTGAACAAGTGATCTGTGTCCACGATGTCTCATCCATCTACCGAGTCCCCTTGTTGTT
AGAGGAGCAAGGGGTTGTAGATTATTTTCTTCGAAGACTTGACCTTCCTATTGAGAGGCAGCCAAGAAAA
ATGCTGATGAAATGGAAAGAGATGGCTGACAGATATGATCGCTTGCTGGAGACCTGCTCTATTGCCCTTG
TGGGCAAATACACGAAGTTCTCAGACTCCTATGCCTCTGTCATTAAGGCTCTGGAGCATTCTGCACTGGC
CATCAACCACAAATTGGAAATCAAGTACATAGATTCTGCGGACTTGGAGCCCATCACCTCGCAAGAAGAG
CCCGTGCGCTACCACGAAGCTTGGCAGAAGCTCTGTAGTGCTCATGGAGTGCTGGTTCCAGGAGGATTTG
GTGTTCGAGGAACAGAAGGAAAAATCCAAGCAATTGCCTGGGCTCGGAATCAGAAAAAGCCTTTTTTGGG
CGTGTGCTTAGGGATGCAGTTGGCAGTGGTTGAATTCTCAAGAAACGTGCTGGGATGGCAAGATGCCAAT
TCTACAGAGTTTGACCCTACGACCAGTCATCCCGTGGTCGTAGACATGCCAGAACACAACCCAGGGCAGA
TGGGCGGAACCATGAGGCTGGGCAAGAGGAGAACCCTGTTCCAGACCAAGAACTCAGTCATGAGGAAACT
CTATGGAGACGCAGACTACTTGGAAGAGAGGCACCGCCACCGATTTGAGGTGAATCCAGTCTGGAAAAAG
TGTTTGGAAGAACAAGGCTTGAAGTTTGTTGGCCAAGATGTTGAAGGAGAGAGAATGGAAATTGTGGAGT
TAGAAGATCATCCCTTTTTTGTTGGGGTTCAGTACCACCCTGAGTTCCTGTCCAGGCCTATCAAGCCCTC
CCCACCATACTTTGGCCTCCTCCTGGCCTCTGTGGGGCGGCTCTCACATTACCTCCAGAAAGGCTGCAGG
CTCTCACCCAGGGACACCTATAGTGACAGGAGTGGAAGCAGCTCCCCTGACTCTGAAATCACCGAACTGA
AGTTTCCATCAATAAATCATGACTGA

Translation (591 aa):
MKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLD
LGNYERFLDIRLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQALIPVDEDGLEP
QVCVIELGGTVGDIESMPFIEAFRQFQFKVKRENFCNIHVSLVPQPSSTGEQKTKPTQNSVRELRGLGLS
PDLVVCRCSNPLDTSVKEKISMFCHVEPEQVICVHDVSSIYRVPLLLEEQGVVDYFLRRLDLPIERQPRK
MLMKWKEMADRYDRLLETCSIALVGKYTKFSDSYASVIKALEHSALAINHKLEIKYIDSADLEPITSQEE
PVRYHEAWQKLCSAHGVLVPGGFGVRGTEGKIQAIAWARNQKKPFLGVCLGMQLAVVEFSRNVLGWQDAN
STEFDPTTSHPVVVDMPEHNPGQMGGTMRLGKRRTLFQTKNSVMRKLYGDADYLEERHRHRFEVNPVWKK
CLEEQGLKFVGQDVEGERMEIVELEDHPFFVGVQYHPEFLSRPIKPSPPYFGLLLASVGRLSHYLQKGCR
LSPRDTYSDRSGSSSPDSEITELKFPSINHD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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