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Report for CCDS33715.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33715.2 Public Homo sapiens 3 EFHB 24 110 108 CCDS HistoryNCBI Gene:151651Re-query CCDS DB by CCDS ID:33715.2Re-query CCDS DB by GeneID:151651See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 33715.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295824.14 ENSP00000295824.9 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000295824.14Link to Ensembl Protein Viewer:ENSP00000295824.9Re-query CCDS DB by Nucleotide ID:ENST00000295824Re-query CCDS DB by Protein ID:ENSP00000295824
Original member Current member NCBI NM_144715.4 NP_653316.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144715.4Link to Protein Sequence:NP_653316.3Re-query CCDS DB by Nucleotide ID:NM_144715Re-query CCDS DB by Protein ID:NP_653316Link to BLAST:NP_653316.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653316.3 833 Q8N7U6-1 833 100% 0 0

Chromosomal Locations for CCDS 33715.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 19879631 19879804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19882550 19882731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19884403 19884615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19888444 19888651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19896687 19896841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19898778 19898845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19899432 19899515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19905620 19905749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19915303 19915413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19918232 19918412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19919833 19919976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19920505 19920567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 19933230 19934018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2502 nt):
ATGAACATGGAGATTGGACATCCCCACGAAGGAAAGGATGATTTAGGAGACAAGAGGGTCATCATGGGAA
CAAAATTTCCCATGGAGTTGGGGATCAGAGTAGGATTAGGAAAAGAAGATTCCCGATGCGGGGAGAGCCC
TGTGGTTAGTAATAAGTGTGAGGGAAGGATGGCACCACCAGAAACAAAATTTCCATTGAGCAAGGGGCTT
GAAATGGGATTAGAAAGACAGAATATTTCTAGGACTGTCATGCAGAGGGGTAGTTTAGGAGTCGACAGTG
TCTCAGCTTCACAGGGAACAAAACCTTCTCTGTTGCCAGGAAGAATGGGGTTAGAAAATGAGAGTCTTCT
TGCAGGATATACCCATGAACGGATAATACAGCCTCCTTTGGGCAGGGTGTGTGGAAGTTCACAGGCTGCA
GGGAGCAGGAGAGCTCCTTTGGCTAGTGGCCCTGAAGGGGTAGAGGAATTAGTGGGAAAGCCTGCTTTCG
TTATGGAACCAAGACAGGAAATGGAAAAAGAGTCTACCTGTGTTTTAATGAAACCCAACACAGAGATTAA
GCTTCCTGTGGAGGTGGACATTGGACTAACCCAAGCCGAGGGGCCAGATGAGACTAAGAATACAGAGCCC
CAAATGGGCTTGGTGATAGAACCTCCCCAATGCCAGTTTGCCCAACAACATGAACAGAGAAAGGAGGCTG
GAAACATTGAATCAGGAGTGGAACCTCCAGATCGCATCAGACCCATATACTCTGGGAAGTTTTTTGATCG
GACCCCTTGCTGGCCAAGTGCAGGAAAAGTTATTCCAGTTGGTTACAGAGTTGCAACCTGCTTGACTGAA
AAACTTCCCAGGCTAATTACTCCACCTGAAGCAAAAAAGTATTTCAACTTCAGATATCCACCTGCTGGAG
TAGAAAGAGTATTTTACGGAAGAGCAAATGATCCCCAGATTGCACCTTATTTGACACATGGAATTAGATC
TAAAATTTCAGTACTGGCAAACACATTGATAAACCCACAGCCTATTACCACATTTCAACAGAAAATTAAA
GATAAAAAAGAATCTATATATCTTAGCAATCGACGAGCACCATTAGGAAAATCTCACGATCAAGCACCAG
GATTACCAAAAGGCATGGACACAACCAATACGACATTTGGGACAGCAGTCATCAAAGAATACTCTGCTAA
AGATGTGGTGAATCCACCAAAATCCTATGAAGAAGTATTTAAAGAAGGAAATGAAGGACATGATTTGTAT
GTTGTTTCTCACAATGATTATTATGCAGGAGAGGCAAAGAACCGAAAGTATAACCCATCAAGTTTCCATA
GGTGTAGTGTGTATGGAGTACCAACACCACATTTTAATGATGGACGAGCCATGGCAAAATCTCTATATTG
GCTCCATGAACTACAAATGAAAAGAGGAGCTAAGTTTGTATCCAAAAGAGCAGATGATTTCAAAGAAAAG
TTTCAACATAAACTTGGAAGAGTTTTAGATCCCATTGCAGAAACAATGAATGTTCCCCCAGACTGCACAT
TTGGAGCTTGTCTCCGTCCTGAGGAATATGGAGTTGGTGATCTCATCCATAATAGACTTCCGGATGAATA
TCTTCGAGGCAAGGATAGACAGCGAGCCCTGATTGCAGCAGTTCGGCATCACCTGAAGAAAGTTAATTAC
CAAAAGTTTGACACTTTGCTGGCAGCCTTCAGGCACTATGACAAGAAGGGAGATGGGATGATAGATAAAG
ACGAGCTGCAGGAAGCTTGTGACCAGGCCAACTTGAGTTTAGATGACAAGCTCCTGGACCAGCTATTTGA
CTACTGTGATGTGGATAATGATGGCTTCATTAACTATCTGGAATTCGCAAATTTTCTTAACTGGAAAGAC
AAAATGCTTCTTAAAGAGTATGAAGAGAGGGTCATTATTAAAGGTAGAAAACCAGATTGTGTAAACCCTA
CTGAGGCTAATGTTGAAGAACCTGAACAAACTCTCCTCATAAAGCCAGAAGATATTGTCTTAAAAGAAGC
AGGAAGCACAGAAAAGACTCTCCGGACACTTCTGAGACCAAGTGATAAAGTTTCCAACTACTATAAGACA
ACTTCTTCTGAGATCAATGCAATTGTAGGAGCCATTCCTTCTACTTGTTACCCCATTTGTGGTGTTCCAA
CCATTCGATCTGACATTCCTGCTCCCCGAATTCGTCGCATCAGTGACAGAACTAATTATGGTGAAGAAGG
TAGTGCATATTCACTACTATATCCTACCATTTTTGCCCGGAAAGGAGTGTTTGAAAGAGACTTCTTCAAG
ACCAGATCAAAAGAAGAGATTGCAGAGATATTGTGTAACATTGGTGTCAAACTGTCTGATGAAGAATTTG
AAAATGTATGGAATCTTGCATCAAAAAAGCATCACAGAGGAGAAGTTTGTGTTGAGAACATCAGAAATGT
TCTAGATGAGCTACGGCATGCAGACCGGATCAAGTGTAAAACACTCATGTGA

Translation (833 aa):
MNMEIGHPHEGKDDLGDKRVIMGTKFPMELGIRVGLGKEDSRCGESPVVSNKCEGRMAPPETKFPLSKGL
EMGLERQNISRTVMQRGSLGVDSVSASQGTKPSLLPGRMGLENESLLAGYTHERIIQPPLGRVCGSSQAA
GSRRAPLASGPEGVEELVGKPAFVMEPRQEMEKESTCVLMKPNTEIKLPVEVDIGLTQAEGPDETKNTEP
QMGLVIEPPQCQFAQQHEQRKEAGNIESGVEPPDRIRPIYSGKFFDRTPCWPSAGKVIPVGYRVATCLTE
KLPRLITPPEAKKYFNFRYPPAGVERVFYGRANDPQIAPYLTHGIRSKISVLANTLINPQPITTFQQKIK
DKKESIYLSNRRAPLGKSHDQAPGLPKGMDTTNTTFGTAVIKEYSAKDVVNPPKSYEEVFKEGNEGHDLY
VVSHNDYYAGEAKNRKYNPSSFHRCSVYGVPTPHFNDGRAMAKSLYWLHELQMKRGAKFVSKRADDFKEK
FQHKLGRVLDPIAETMNVPPDCTFGACLRPEEYGVGDLIHNRLPDEYLRGKDRQRALIAAVRHHLKKVNY
QKFDTLLAAFRHYDKKGDGMIDKDELQEACDQANLSLDDKLLDQLFDYCDVDNDGFINYLEFANFLNWKD
KMLLKEYEERVIIKGRKPDCVNPTEANVEEPEQTLLIKPEDIVLKEAGSTEKTLRTLLRPSDKVSNYYKT
TSSEINAIVGAIPSTCYPICGVPTIRSDIPAPRIRRISDRTNYGEEGSAYSLLYPTIFARKGVFERDFFK
TRSKEEIAEILCNIGVKLSDEEFENVWNLASKKHHRGEVCVENIRNVLDELRHADRIKCKTLM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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