CCDS
Home
FTP
Process
Releases & Statistics
Collaborators
EBI
HGNC
MGI
NCBI
Contact Us
email CCDS
Genome Displays Related Resources
Gene
HomoloGene
MANE
RefSeq
|
![](/corehtml/transparent.gif) |
Report for CCDS33351.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
33351.2 |
Public |
Homo sapiens |
2 |
ANKAR |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:150709](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:33351.2](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 2 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public Note for CCDS 33351.1 |
The coding region has been updated to extend the N-terminus to one that is more supported by the available transcript and conservation data. |
Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)
Attributes |
Inferred exon combination |
Sequence IDs included in CCDS 33351.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000313581.4 |
ENSP00000313513.4 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000313581.4](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000313513.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000313581](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000313513](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000520309.5 |
ENSP00000427882.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000520309.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000427882.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000520309](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000427882](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000684021.1 |
ENSP00000507233.1 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000684021.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000507233.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000684021](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000507233](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001378068.1 |
NP_001364997.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001378068.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001364997.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001378068](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001364997](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001364997.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_144708.3 |
NP_653309.3 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_144708.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_653309.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_144708](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_653309](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_653309.3](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 33351.2
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (4305 nt): ATGTTAAGATTGCCCAAAAAAGGATTACCTAGATTTGAGCAAGTTCAGGATGAAGACACCTACCTGGAAA ATTTAGCAATACAAAGAAATGCATCTGCTTTTTTTGAAAAATATGATCGGAGTGAAATACAAGAGTTACT AACTACTGCACTAGTTAGCTGGTTGTCTGCCAAAGAGGATGTGCGCTCTCAAGTAGACCTCCCATGTGGA ATTATGAGTCAAATGAATAACGTAGGCTTCTCCACTGCAATCCTACTGACTCCCGTGGACCCTACTGCCC TCTTAGACTATAGAGAGGTCCATCAAATGATAAGAGAGTTGGCTATTGGAATTTATTGCCTAAATCAAAT CCCTTCCATCAGTTTAGAAGCTAATTATGATCAGAGTTCTTCTTGTCAATTACCTCCAGCTTATTATGAT ACCAGAATTGGGCAAATTCTGATCAATATTGACTACATGCTGAAAGCACTATGGCATGGAATATATATGC CCAAAGAAAAACGAGCTAGATTCTCTGAATTGTGGCGTGCCATCATGGACATTGATCCTGATGGAAAACC TCAAACAAATAAAGACATTTTTTCAGAGTTTAGTTCAGCAGGTTTGACTGATATTACAAAGGATCCAGAC TTTAATGAAATCTATGATGAAGACGTGAATGAAGATCCAACATATGATCCCAACAGCCCTGAAGAAACAG CTGTATTTATGAAATATGCTGAAAATATTATGCTAAAGTTAACATTCAGTACCACACAAATTCAACAGTA TGAAAATGTCTTTATATTTGAAACAGGCTATTGGCTTACTAATGCTATAAAATATAATCAGGATTATCTT GATATCTGTACCTACCAGAGACTACAGCAAAGATTATATCTTCAAAAAAAGATTATTCAAAAACACTTTG AGAAGAAAAAAGATATCAGAAGAGGGATAGGATACCTAAAGTTAATATGTTTTCTGATTCCATTTCTACT GAGTTTAAAGAAGAAAATGAAAGTTCCATATTTAAGTAGTCTGCTTCAGCCTTTTTCAGATGACAAGGTC AAGACAGAGCGAGAATTGCCTCCATTTATTTATGGAAGAGATTTTAAATGCCAGAATTTTCACTACAAAG AGAATCAATATTTTCATGTTCATGGAGGAATTGAATTTGATATCAGCACCCCTTCAATTGAGAATGCCTT GGAAGATTTTCAGAAAAATTTAGAAAAAATACGAGATTGTGCTGCTAATACATTTATAGAAGATTCAGGA TATAAAGAATATTACTCAATACCAGTCATGGAATTTCATGGAAAAAGCTACTATGTGATCTATTTTGAAC TAGAAACTTTCTATCAGCAACTATATAAGACACAGTGGTGGGGAGCCATAAATGAAATAGTGAACAATCT GAGACTGAAAAGACTTCCACTGACAGATGCTCAATTACATGAACAATTTAAGAAAAAGCTTGGTTTCAAA AGAGCTATGAAATGCAAGAGTATTCCATTTGGTATGAAGTCCGCTGTTGAAAGAGGGTTGTCTGCAGTTT TCCACACATTTAGCCGTAAAACCTCAAGCTCAACAATCAATGTTTCAGATGAAGCAGGTTATACTATTTT TCATCATGCTGCCCTGCACAACAGAGTTTCTATTATATGTCAACTGTGCAATGCTAACTTCAAGGTCAAC CAGAGGCGCTTTGTTACGTTCAGCCAAGGTCCAACACCTCTACACCTTGCTGCACAGGCTTGCTCATTAG AAACAACAGTTTGTCTACTGTGTTCCAAAGCTGATTACACGCTTTCTGAAAAAAGAGGCTGGATGCCGAT TCACTTTGCCGCTTTCTATGACAACGTTTGCATCATTATTGCTCTCTGTAGGAAGGATCCTAGTTTGCTA GAAGCTGAGGCAACAGCTGAGAATCAGTGCACTCCACTGTTACTTGCTGCCACTTCAGGAGCACTGGACA CTATTCAATACCTGTTTTCTATCGGTGCTAACTGGAGAAAAACAGATATTAAAGGAAATAATATAATCCA TTTATCAGTGTTAACCTTTCATACAGAGGTTCTCAAATATATAATAAAATTAAATATTCCTGAACTCCCA GTGTGGAAAACTTTGGTAGAAATGTTACAGTGTGAAAGCTATAAACGAAGGATGATGGCCGTCATGTCCT TGGAAGTAATTTGCTTAGCAAATGATCAATACTGGAGATGTATTTTGGATGCAGGCACCATTCCTGCCTT AATCAATCTATTAAAAAGTTCCAAAATAAAACTGCAGTGCAAAACTGTTGGGTTATTGAGTAATATCTCA ACCCACAAAAGTGCAGTGCATGCTTTGGTAGAAGCGGGAGGCATTCCATCTCTAATCAACCTACTGGTTT GTGATGAGCCTGAAGTACACTCTCGCTGTGCTGTCATTCTATATGATATTGCTCAATGTGAAAACAAGGA TGTTATTGCCAAATATAATGGAATCCCAAGCCTGATAAATCTATTGAACTTAAACATAGAAAATGTGCTA GTAAATGTAATGAACTGTATACGGGTATTGTGTATAGGAAATGAAAACAATCAAAGAGCTGTGAGAGAAC ATAAAGGCCTCCCATATCTTATCAGATTTCTGAGTTCTGATTCAGATGTGTTGAAGGCTGTATCTTCTGC TGCAATTGCTGAGGTTGGGCGTGACAATAAGGAAATTCAGGATGCTATAGCTATGGAGGGAGCGATTCCT CCTCTGGTGGCTCTTTTTAAAGGGAAACAAATTAGTGTCCAAATGAAAGGTGCAATGGCTGTGGAATCAC TGGCAAGTCACAACGCTCTTATACAGAAAGCATTTCTGGAAAAATCGTTAACTAAATATCTTTTAAAACT CCTAAAGGCATTTCAAATAGATGTTAAGGAACAAGGAGCTGTTGCACTTTGGGCCTTGGCAGGACAAACA CTAAAACAACAAAAATATATGGCAGAACAAATTGGATACAGCTTTATAATAAATATGCTTTTGTCACCAT CAGCTAAAATGCAGTATGTTGGAGGTGAAGCTGTCATAGCTCTAAGTAAGGACAGCAGGATGCATCAAAA TCAAATATGTGAAGGGAATGGAATTGCACCATTGGTTCGCTTACTAAGAATTAGTACGATTGCTGAAGGC ACACTTCTCAGTGTCATCAGAGCAGTGGGATCCATTTGTATTGGTGTAGCCCATACAAGCAATCCTGTCA GTCAACAATTGGTTGTAGATGAAAATGCCTTTCCAGTACTTATCCAACTACTAAGAAATCACCCTTCTCC TAACATTAAGGTTGAAGTGGCATTTTCCTTGGCATGCATTGTCCTAGGGAATGATGTGTTACAGAAAGAC TTACATGAAAATGAAGGATTTGAATATGCTGATGTCCTTTATCTTCTTCACTCAACAGAAAAGGATATTT GCTTAAGAGCAGGCTATGCATTAACACTTTTTGCCTTCAATAATCGCTTTCAACAATACTTAATATTGGA AAGTGGAATAATGACCATATCTATTTTTGAACGTTTTCTTGAATCAACAGTTGAAACTGAGAAGGCAATG GCAGCATTTCAGATTGTTGTACTGGCTAAAGTCATTAGAGATATGGACCATATTACTTTGTCTGCAAGAG GTGTTACTATTTTAGTTGATAGTCTGTATTCAGTTCAGACTTCTACTATTGTCTTGACAGGGAATTTAAT AGCAAGCCTGGCTCATTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCTC TGCTATCATTTGTACTCGGGAATAGAAGAGGTTCGTGCAGCTTGTTCCTCTGCTCTTGGCTACTTAACAT ACAATGCAAATGCTTTCCGCATCCTATTAAAAGAATGCAGGAATAAACCTAATCAGTTCATTCGTATAAA AAATAATATCAGCAGAGATGCAAGTATTAACCCAGCATTTTTAAAGGAATTTCAAATGCAACAAACACTG GTGGGACTTCCTTCCTTAAGTCTGGAGAAGAATGGAGGACCATCCATAATTCCTATCTTTAAAAGAGGGA AGGAGCACCGAAGAAAATTAAAACCTAAAATTCAACCAAAAGATTCTTTGACTTTATTACCTCCTGTAAC TAACTTCATGGGACTCTTCAAAGCAACAAAAAAGACCAAGGATTCCCATAATATTTTTTCTTTTTCATCT ACAATTACATCAGATATCACAAATGTATCAAGACCAAGAATAGTGTGTTTGAACCAACTTGGGAAACATG TCCAGAAAGCCAACCCAGAGCCTGCAGAAGGCTAA
Translation (1434 aa): MLRLPKKGLPRFEQVQDEDTYLENLAIQRNASAFFEKYDRSEIQELLTTALVSWLSAKEDVRSQVDLPCG IMSQMNNVGFSTAILLTPVDPTALLDYREVHQMIRELAIGIYCLNQIPSISLEANYDQSSSCQLPPAYYD TRIGQILINIDYMLKALWHGIYMPKEKRARFSELWRAIMDIDPDGKPQTNKDIFSEFSSAGLTDITKDPD FNEIYDEDVNEDPTYDPNSPEETAVFMKYAENIMLKLTFSTTQIQQYENVFIFETGYWLTNAIKYNQDYL DICTYQRLQQRLYLQKKIIQKHFEKKKDIRRGIGYLKLICFLIPFLLSLKKKMKVPYLSSLLQPFSDDKV KTERELPPFIYGRDFKCQNFHYKENQYFHVHGGIEFDISTPSIENALEDFQKNLEKIRDCAANTFIEDSG YKEYYSIPVMEFHGKSYYVIYFELETFYQQLYKTQWWGAINEIVNNLRLKRLPLTDAQLHEQFKKKLGFK RAMKCKSIPFGMKSAVERGLSAVFHTFSRKTSSSTINVSDEAGYTIFHHAALHNRVSIICQLCNANFKVN QRRFVTFSQGPTPLHLAAQACSLETTVCLLCSKADYTLSEKRGWMPIHFAAFYDNVCIIIALCRKDPSLL EAEATAENQCTPLLLAATSGALDTIQYLFSIGANWRKTDIKGNNIIHLSVLTFHTEVLKYIIKLNIPELP VWKTLVEMLQCESYKRRMMAVMSLEVICLANDQYWRCILDAGTIPALINLLKSSKIKLQCKTVGLLSNIS THKSAVHALVEAGGIPSLINLLVCDEPEVHSRCAVILYDIAQCENKDVIAKYNGIPSLINLLNLNIENVL VNVMNCIRVLCIGNENNQRAVREHKGLPYLIRFLSSDSDVLKAVSSAAIAEVGRDNKEIQDAIAMEGAIP PLVALFKGKQISVQMKGAMAVESLASHNALIQKAFLEKSLTKYLLKLLKAFQIDVKEQGAVALWALAGQT LKQQKYMAEQIGYSFIINMLLSPSAKMQYVGGEAVIALSKDSRMHQNQICEGNGIAPLVRLLRISTIAEG TLLSVIRAVGSICIGVAHTSNPVSQQLVVDENAFPVLIQLLRNHPSPNIKVEVAFSLACIVLGNDVLQKD LHENEGFEYADVLYLLHSTEKDICLRAGYALTLFAFNNRFQQYLILESGIMTISIFERFLESTVETEKAM AAFQIVVLAKVIRDMDHITLSARGVTILVDSLYSVQTSTIVLTGNLIASLAHSRAGIPEAFTTLGTIQRL CYHLYSGIEEVRAACSSALGYLTYNANAFRILLKECRNKPNQFIRIKNNISRDASINPAFLKEFQMQQTL VGLPSLSLEKNGGPSIIPIFKRGKEHRRKLKPKIQPKDSLTLLPPVTNFMGLFKATKKTKDSHNIFSFSS TITSDITNVSRPRIVCLNQLGKHVQKANPEPAEG
|