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Report for CCDS1638.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1638.1 Public Homo sapiens 1 ZNF672 24 110 108 CCDS HistoryNCBI Gene:79894Re-query CCDS DB by CCDS ID:1638.1Re-query CCDS DB by GeneID:79894See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1638.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000306562.8 ENSP00000421915.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000306562.8Link to Ensembl Protein Viewer:ENSP00000421915.1Re-query CCDS DB by Nucleotide ID:ENST00000306562Re-query CCDS DB by Protein ID:ENSP00000421915
Original member Current member NCBI NM_024836.3 NP_079112.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024836.3Link to Protein Sequence:NP_079112.1Re-query CCDS DB by Nucleotide ID:NM_024836Re-query CCDS DB by Protein ID:NP_079112Link to BLAST:NP_079112.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079112.1 452 Q499Z4 452 100% 0 0

Chromosomal Locations for CCDS 1638.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 248847275 248848633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1359 nt):
ATGTTTGCCACATCTGGGGCAGTGGCAGCGGGGAAGCCTTACTCGTGCAGCGAATGTGGCAAGAGCTTCT
GCTACAGCTCAGTGCTGCTGCGACATGAACGAGCTCACGGCGGTGACGGCCGCTTCCGTTGCCTAGAATG
CGGTGAGCGCTGTGCACGGGCTGCTGACCTCCGAGCGCACAGGCGCACGCATGCTGGCCAGACCCTCTAC
ATCTGCAGTGAGTGCGGACAAAGCTTCCGCCACAGCGGCCGTCTTGACCTACACTTGGGCGCACACCGGC
AGCGATGCCGCACTTGCCCCTGCCGCACATGCGGCCGGCGCTTCCCGCACCTCCCGGCGCTGCTGCTACA
CCGGCGCCGCCAGCATCTGCCAGAGCGGCCCCGCCGCTGCCCGCTGTGCGCCCGCACCTTCCGGCAGAGC
GCGCTGCTCTTCCACCAGGCGCGGGCGCACCCCTTGGGGACAACCTCTGACCCTGCTGCCCCACCCCACC
GCTGCGCGCAGTGCCCGCGAGCCTTCCGAAGCGGCGCCGGGCTGCGGAGTCACGCGCGCATCCACGTGTC
CCGGAGCCCCACGCGACCCCGTGTCTCAGACGCCCACCAGTGTGGCGTGTGCGGCAAGTGCTTTGGCAAG
AGCTCTACGCTGACGCGACACCTGCAGACGCACTCGGGGGAGAAACCCTTCAAGTGCCCGGAGTGCGGCA
AGGGCTTCCTGGAGAGCGCCACGCTGGTGCGCCACCAGCGCACACACACGGGCGAGAAGCCGTACGCATG
TGGCGACTGTGGACGCTGCTTCAGCGAGAGTTCCACGCTGCTGCGCCATCGGCGCAGCCATCAGGGCGAG
CGGCCACATGCGTGCGCCACTTGCGGCAAGGGTTTCGGGCAGCGCTCCGACCTGGTGGTGCACCAGCGCA
TCCACACGGGCGAGAAGCCCTTCGCGTGCCCCGAGTGCGGCCGCCGCTTCAGCGACCGCTCGGACCTCAC
CAAGCACCGGCGCACGCACACGGGCGAGAAGCCCTACCGCTGCGAACTGTGCGGCAAGCGGTTCACGTGC
GTGTCCAATCTCAACGTGCATCGGCGCAACCATGCCGGCCACAAGCCACACAAATGCCCCGAGTGCAGCA
AGGCCTTCAGCGTCGCCTCCAAGCTTGCACTGCACCGCAAGACGCACCTGGGCGAACGGCCAGCGGAGTG
CGCAGAGTGCGGCAAGTGCTTCAGCCACAGCCGCTCGCTGTCACAGCATCAGCGGGCCCACACGCGCGCC
CGCACCGCTGCCGCCGTTGCCATCCAGTCCGCAGTGGGCACTGCCCTCGTCTTTGAGGGGCCGGCTGAAC
AGGAAAAGCCAGGGTTCTCTGTGTCCTAG

Translation (452 aa):
MFATSGAVAAGKPYSCSECGKSFCYSSVLLRHERAHGGDGRFRCLECGERCARAADLRAHRRTHAGQTLY
ICSECGQSFRHSGRLDLHLGAHRQRCRTCPCRTCGRRFPHLPALLLHRRRQHLPERPRRCPLCARTFRQS
ALLFHQARAHPLGTTSDPAAPPHRCAQCPRAFRSGAGLRSHARIHVSRSPTRPRVSDAHQCGVCGKCFGK
SSTLTRHLQTHSGEKPFKCPECGKGFLESATLVRHQRTHTGEKPYACGDCGRCFSESSTLLRHRRSHQGE
RPHACATCGKGFGQRSDLVVHQRIHTGEKPFACPECGRRFSDRSDLTKHRRTHTGEKPYRCELCGKRFTC
VSNLNVHRRNHAGHKPHKCPECSKAFSVASKLALHRKTHLGERPAECAECGKCFSHSRSLSQHQRAHTRA
RTAAAVAIQSAVGTALVFEGPAEQEKPGFSVS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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