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Report for CCDS1929.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1929.1 Public Homo sapiens 2 STAMBP 24 110 108 CCDS HistoryNCBI Gene:10617Re-query CCDS DB by CCDS ID:1929.1Re-query CCDS DB by GeneID:10617See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1929.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000339566.7 ENSP00000344742.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000339566.7Link to Ensembl Protein Viewer:ENSP00000344742.3Re-query CCDS DB by Nucleotide ID:ENST00000339566Re-query CCDS DB by Protein ID:ENSP00000344742
Original member Current member EBI ENST00000394070.7 ENSP00000377633.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000394070.7Link to Ensembl Protein Viewer:ENSP00000377633.2Re-query CCDS DB by Nucleotide ID:ENST00000394070Re-query CCDS DB by Protein ID:ENSP00000377633
Original member Current member EBI ENST00000394073.6 ENSP00000377636.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394073.6Link to Ensembl Protein Viewer:ENSP00000377636.1Re-query CCDS DB by Nucleotide ID:ENST00000394073Re-query CCDS DB by Protein ID:ENSP00000377636
Original member Current member EBI ENST00000409707.6 ENSP00000386548.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409707.6Link to Ensembl Protein Viewer:ENSP00000386548.1Re-query CCDS DB by Nucleotide ID:ENST00000409707Re-query CCDS DB by Protein ID:ENSP00000386548
Original member Current member EBI ENST00000682351.1 ENSP00000506833.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682351.1Link to Ensembl Protein Viewer:ENSP00000506833.1Re-query CCDS DB by Nucleotide ID:ENST00000682351Re-query CCDS DB by Protein ID:ENSP00000506833
Original member Current member EBI ENST00000684095.1 ENSP00000506845.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000684095.1Link to Ensembl Protein Viewer:ENSP00000506845.1Re-query CCDS DB by Nucleotide ID:ENST00000684095Re-query CCDS DB by Protein ID:ENSP00000506845
Original member Current member EBI ENST00000683518.1 ENSP00000506865.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000683518.1Link to Ensembl Protein Viewer:ENSP00000506865.1Re-query CCDS DB by Nucleotide ID:ENST00000683518Re-query CCDS DB by Protein ID:ENSP00000506865
Original member Current member EBI ENST00000684312.1 ENSP00000506958.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000684312.1Link to Ensembl Protein Viewer:ENSP00000506958.1Re-query CCDS DB by Nucleotide ID:ENST00000684312Re-query CCDS DB by Protein ID:ENSP00000506958
Original member Current member EBI ENST00000682558.1 ENSP00000507014.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682558.1Link to Ensembl Protein Viewer:ENSP00000507014.1Re-query CCDS DB by Nucleotide ID:ENST00000682558Re-query CCDS DB by Protein ID:ENSP00000507014
Original member Current member EBI ENST00000684585.1 ENSP00000507054.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000684585.1Link to Ensembl Protein Viewer:ENSP00000507054.1Re-query CCDS DB by Nucleotide ID:ENST00000684585Re-query CCDS DB by Protein ID:ENSP00000507054
Original member Current member EBI ENST00000682379.1 ENSP00000507081.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682379.1Link to Ensembl Protein Viewer:ENSP00000507081.1Re-query CCDS DB by Nucleotide ID:ENST00000682379Re-query CCDS DB by Protein ID:ENSP00000507081
Original member Current member EBI ENST00000683317.1 ENSP00000507092.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000683317.1Link to Ensembl Protein Viewer:ENSP00000507092.1Re-query CCDS DB by Nucleotide ID:ENST00000683317Re-query CCDS DB by Protein ID:ENSP00000507092
Original member Current member EBI ENST00000683036.1 ENSP00000507639.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000683036.1Link to Ensembl Protein Viewer:ENSP00000507639.1Re-query CCDS DB by Nucleotide ID:ENST00000683036Re-query CCDS DB by Protein ID:ENSP00000507639
Original member Current member EBI ENST00000683818.1 ENSP00000507658.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000683818.1Link to Ensembl Protein Viewer:ENSP00000507658.1Re-query CCDS DB by Nucleotide ID:ENST00000683818Re-query CCDS DB by Protein ID:ENSP00000507658
Original member Current member EBI ENST00000682847.1 ENSP00000507864.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682847.1Link to Ensembl Protein Viewer:ENSP00000507864.1Re-query CCDS DB by Nucleotide ID:ENST00000682847Re-query CCDS DB by Protein ID:ENSP00000507864
Original member Current member NCBI NM_001353967.2 NP_001340896.1 Accepted alive Link to Nucleotide Sequence:NM_001353967.2Link to Protein Sequence:NP_001340896.1Re-query CCDS DB by Nucleotide ID:NM_001353967Re-query CCDS DB by Protein ID:NP_001340896Link to BLAST:NP_001340896.1
Original member Current member NCBI NM_001353968.2 NP_001340897.1 Accepted alive Link to Nucleotide Sequence:NM_001353968.2Link to Protein Sequence:NP_001340897.1Re-query CCDS DB by Nucleotide ID:NM_001353968Re-query CCDS DB by Protein ID:NP_001340897Link to BLAST:NP_001340897.1
Original member Current member NCBI NM_006463.6 NP_006454.1 Accepted alive Link to Nucleotide Sequence:NM_006463.6Link to Protein Sequence:NP_006454.1Re-query CCDS DB by Nucleotide ID:NM_006463Re-query CCDS DB by Protein ID:NP_006454Link to BLAST:NP_006454.1
Original member Current member NCBI NM_201647.4 NP_964010.1 Accepted alive Link to Nucleotide Sequence:NM_201647.4Link to Protein Sequence:NP_964010.1Re-query CCDS DB by Nucleotide ID:NM_201647Re-query CCDS DB by Protein ID:NP_964010Link to BLAST:NP_964010.1
Original member Current member NCBI NM_213622.4 NP_998787.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_213622.4Link to Protein Sequence:NP_998787.1Re-query CCDS DB by Nucleotide ID:NM_213622Re-query CCDS DB by Protein ID:NP_998787Link to BLAST:NP_998787.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001340896.1 424 O95630-1 424 100% 0 0
NP_001340897.1 424 O95630-1 424 100% 0 0
NP_006454.1 424 O95630-1 424 100% 0 0
NP_964010.1 424 O95630-1 424 100% 0 0
NP_998787.1 424 O95630-1 424 100% 0 0

Chromosomal Locations for CCDS 1929.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 73830857 73831059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73844813 73844888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73845167 73845262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73847387 73847753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73849363 73849487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73850376 73850513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73859254 73859366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73860052 73860151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73862203 73862259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1275 nt):
ATGTCTGACCATGGAGATGTGAGCCTCCCGCCCGAAGACCGGGTGAGGGCTCTCTCCCAGCTGGGTAGTG
CGGTAGAGGTGAATGAAGACATTCCACCCCGTCGGTACTTCCGCTCTGGAGTTGAGATTATCCGAATGGC
ATCCATTTACTCTGAGGAAGGCAACATTGAACATGCCTTCATCCTCTATAACAAGTATATCACGCTCTTT
ATTGAGAAACTACCAAAACATCGAGATTACAAATCTGCTGTCATTCCTGAAAAGAAAGACACAGTAAAGA
AATTAAAGGAGATTGCATTTCCCAAAGCAGAAGAGCTGAAGGCAGAGCTGTTAAAACGATATACCAAAGA
ATATACAGAATATAATGAAGAAAAGAAGAAGGAAGCAGAGGAATTGGCCCGGAACATGGCCATCCAGCAA
GAGCTGGAAAAGGAAAAACAGAGGGTAGCACAACAGAAGCAGCAGCAATTGGAACAGGAACAGTTCCATG
CCTTCGAGGAGATGATCCGGAACCAGGAGCTAGAAAAAGAGCGACTGAAAATTGTACAGGAGTTTGGGAA
GGTAGACCCTGGCCTAGGTGGCCCGCTAGTGCCTGACTTGGAGAAGCCCTCCTTAGATGTGTTCCCCACC
TTAACAGTCTCATCCATACAGCCTTCAGACTGTCACACAACTGTAAGGCCAGCTAAGCCACCTGTGGTGG
ACAGGTCCTTGAAACCTGGAGCACTGAGCAACTCAGAAAGTATTCCCACAATCGATGGATTGCGCCATGT
GGTGGTGCCTGGGCGGCTGTGCCCACAGTTTCTCCAGTTAGCCAGTGCCAACACTGCCCGGGGAGTGGAG
ACATGTGGAATTCTCTGTGGAAAACTGATGAGGAATGAATTTACCATTACCCATGTTCTCATCCCCAAGC
AAAGTGCTGGGTCTGATTACTGCAACACAGAGAACGAAGAAGAACTTTTCCTCATACAGGATCAGCAGGG
CCTCATCACACTGGGCTGGATTCATACTCACCCCACACAGACCGCGTTTCTCTCCAGTGTCGACCTACAC
ACTCACTGCTCTTACCAGATGATGTTGCCAGAGTCAGTAGCCATTGTTTGCTCCCCCAAGTTCCAGGAAA
CTGGATTCTTTAAACTAACTGACCATGGACTAGAGGAGATTTCTTCCTGTCGCCAGAAAGGATTTCATCC
ACACAGCAAGGATCCACCTCTGTTCTGTAGCTGCAGCCACGTGACTGTTGTGGACAGAGCAGTGACCATC
ACAGACCTTCGATGA

Translation (424 aa):
MSDHGDVSLPPEDRVRALSQLGSAVEVNEDIPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLF
IEKLPKHRDYKSAVIPEKKDTVKKLKEIAFPKAEELKAELLKRYTKEYTEYNEEKKKEAEELARNMAIQQ
ELEKEKQRVAQQKQQQLEQEQFHAFEEMIRNQELEKERLKIVQEFGKVDPGLGGPLVPDLEKPSLDVFPT
LTVSSIQPSDCHTTVRPAKPPVVDRSLKPGALSNSESIPTIDGLRHVVVPGRLCPQFLQLASANTARGVE
TCGILCGKLMRNEFTITHVLIPKQSAGSDYCNTENEEELFLIQDQQGLITLGWIHTHPTQTAFLSSVDLH
THCSYQMMLPESVAIVCSPKFQETGFFKLTDHGLEEISSCRQKGFHPHSKDPPLFCSCSHVTVVDRAVTI
TDLR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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