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Report for CCDS31215.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31215.1 Public Homo sapiens 10 PALD1 24 110 108 CCDS HistoryNCBI Gene:27143Re-query CCDS DB by CCDS ID:31215.1Re-query CCDS DB by GeneID:27143See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31215.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263563.7 ENSP00000263563.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263563.7Link to Ensembl Protein Viewer:ENSP00000263563.5Re-query CCDS DB by Nucleotide ID:ENST00000263563Re-query CCDS DB by Protein ID:ENSP00000263563
Original member Current member NCBI NM_014431.3 NP_055246.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014431.3Link to Protein Sequence:NP_055246.2Re-query CCDS DB by Nucleotide ID:NM_014431Re-query CCDS DB by Protein ID:NP_055246Link to BLAST:NP_055246.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055246.2 856 Q9ULE6 856 100% 0 0

Chromosomal Locations for CCDS 31215.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 70525952 70526136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70529229 70529331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70529889 70530068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70531290 70531454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70532621 70532781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70532995 70533070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70533922 70534073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70534425 70534524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70534739 70534843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70537811 70537906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70538280 70538408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70538892 70539008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70539092 70539247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70539580 70539762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70541102 70541242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70541463 70541534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70547306 70547446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70564364 70564519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70566581 70566733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2571 nt):
ATGGGTACAACGGCCAGCACAGCCCAGCAGACGGTCTCGGCAGGCACCCCATTTGAGGGCCTACAGGGCA
GTGGCACGATGGACAGTCGGCACTCCGTCAGCATCCACTCCTTCCAGAGCACTAGCTTGCATAACAGCAA
GGCCAAGTCCATCATCCCCAACAAGGTGGCCCCTGTTGTGATCACGTACAACTGCAAGGAGGAGTTCCAG
ATCCATGATGAGCTGCTCAAGGCTCATTACACGTTGGGCCGGCTCTCGGACAACACCCCTGAGCACTACC
TGGTGCAAGGCCGCTACTTCCTGGTGCGGGATGTCACTGAGAAGATGGATGTGCTGGGCACCGTGGGAAG
CTGTGGGGCCCCCAACTTCCGGCAGGTGCAGGGTGGGCTCACTGTGTTCGGCATGGGACAGCCCAGCCTC
TCAGGGTTCAGGCGGGTCCTCCAGAAACTCCAGAAGGACGGACATAGGGAGTGTGTCATCTTCTGTGTGC
GGGAGGAACCTGTGCTTTTCCTGCGTGCAGATGAGGACTTTGTGTCCTACACACCTCGAGACAAGCAGAA
CCTTCATGAGAACCTCCAGGGCCTTGGACCCGGGGTCCGGGTGGAGAGCCTGGAGCTGGCCATCCGGAAA
GAGATCCACGACTTTGCCCAGCTGAGCGAGAACACATACCATGTGTACCATAACACCGAGGACCTGTGGG
GGGAGCCCCATGCTGTGGCCATCCATGGTGAGGACGACTTGCATGTGACGGAGGAGGTGTACAAGCGGCC
CCTCTTCCTGCAGCCCACCTACAGGTACCACCGCCTGCCCCTGCCCGAGCAAGGGAGTCCCCTGGAGGCC
CAGTTGGACGCCTTTGTCAGTGTTCTCCGGGAGACCCCCAGCCTGCTGCAGCTCCGTGATGCCCACGGGC
CTCCCCCAGCCCTCGTCTTCAGCTGCCAGATGGGCGTGGGCAGGACCAACCTGGGCATGGTCCTGGGCAC
CCTCATCCTGCTTCACCGCAGTGGGACCACCTCCCAGCCAGAGGCTGCCCCCACGCAGGCCAAGCCCCTG
CCTATGGAGCAGTTCCAGGTGATCCAGAGCTTTCTCCGCATGGTGCCCCAGGGAAGGAGGATGGTGGAAG
AGGTGGACAGAGCCATCACTGCCTGTGCCGAGTTGCATGACCTGAAAGAAGTGGTCTTGGAAAACCAGAA
GAAGTTAGAAGGTATCCGACCGGAGAGCCCAGCCCAGGGAAGCGGCAGCCGACACAGCGTCTGGCAGAGG
GCGCTGTGGAGCCTGGAGCGATACTTCTACCTGATCCTGTTTAACTACTACCTTCATGAGCAGTACCCGC
TGGCCTTTGCCCTCAGTTTCAGCCGCTGGCTGTGTGCCCACCCTGAGCTGTACCGCCTGCCCGTGACGCT
GAGCTCAGCAGGCCCTGTGGCTCCGAGGGACCTCATCGCCAGGGGCTCCCTACGGGAGGACGATCTGGTC
TCCCCGGACGCGCTCAGCACTGTCAGAGAGATGGATGTGGCCAACTTCCGGCGGGTGCCCCGCATGCCCA
TCTACGGCACGGCCCAGCCCAGCGCCAAGGCCCTGGGGAGCATCCTGGCCTACCTGACGGACGCCAAGAG
GAGGCTGCGGAAGGTTGTCTGGGTGAGCCTTCGGGAGGAGGCCGTGTTGGAGTGTGACGGGCACACCTAC
AGCCTGCGGTGGCCTGGGCCCCCTGTGGCTCCTGACCAGCTGGAGACCCTGGAGGCCCAGCTGAAGGCCC
ATCTAAGCGAGCCTCCCCCAGGCAAGGAGGGCCCCCTGACCTACAGGTTCCAGACCTGCCTTACCATGCA
GGAGGTCTTCAGCCAGCACCGCAGGGCCTGTCCTGGCCTCACCTACCACCGCATCCCCATGCCGGACTTC
TGTGCCCCCCGAGAGGAGGACTTTGACCAGCTGCTGGAGGCCCTGCGGGCCGCCCTCTCCAAGGACCCAG
GCACTGGCTTCGTGTTCAGCTGCCTCAGCGGCCAGGGCCGTACCACAACTGCGATGGTGGTGGCTGTCCT
GGCCTTCTGGCACATCCAAGGCTTCCCCGAGGTGGGTGAGGAGGAGCTCGTGAGTGTGCCTGATGCCAAG
TTCACTAAGGGTGAATTTCAGGTAGTAATGAAGGTGGTGCAGCTGCTACCCGATGGGCACCGTGTGAAGA
AGGAGGTGGACGCAGCGCTGGACACTGTCAGCGAGACCATGACGCCCATGCACTACCACCTGCGGGAGAT
CATCATCTGCACCTACCGCCAGGCGAAGGCAGCGAAAGAGGCGCAAGAAATGCGGAGGCTGCAGCTGCGG
AGCCTGCAGTACTTGGAGCGCTATGTCTGCCTGATTCTCTTCAACGCGTACCTCCACCTGGAGAAGGCCG
ACTCCTGGCAGAGGCCCTTCAGCACCTGGATGCAGGAGGTGGCATCGAAGGCTGGCATCTACGAGATCCT
TAACGAGCTGGGCTTCCCCGAGCTGGAGAGCGGGGAGGACCAGCCCTTCTCCAGGCTGCGCTACCGGTGG
CAGGAGCAGAGCTGCAGCCTCGAGCCCTCTGCCCCCGAGGACTTGCTGTAG

Translation (856 aa):
MGTTASTAQQTVSAGTPFEGLQGSGTMDSRHSVSIHSFQSTSLHNSKAKSIIPNKVAPVVITYNCKEEFQ
IHDELLKAHYTLGRLSDNTPEHYLVQGRYFLVRDVTEKMDVLGTVGSCGAPNFRQVQGGLTVFGMGQPSL
SGFRRVLQKLQKDGHRECVIFCVREEPVLFLRADEDFVSYTPRDKQNLHENLQGLGPGVRVESLELAIRK
EIHDFAQLSENTYHVYHNTEDLWGEPHAVAIHGEDDLHVTEEVYKRPLFLQPTYRYHRLPLPEQGSPLEA
QLDAFVSVLRETPSLLQLRDAHGPPPALVFSCQMGVGRTNLGMVLGTLILLHRSGTTSQPEAAPTQAKPL
PMEQFQVIQSFLRMVPQGRRMVEEVDRAITACAELHDLKEVVLENQKKLEGIRPESPAQGSGSRHSVWQR
ALWSLERYFYLILFNYYLHEQYPLAFALSFSRWLCAHPELYRLPVTLSSAGPVAPRDLIARGSLREDDLV
SPDALSTVREMDVANFRRVPRMPIYGTAQPSAKALGSILAYLTDAKRRLRKVVWVSLREEAVLECDGHTY
SLRWPGPPVAPDQLETLEAQLKAHLSEPPPGKEGPLTYRFQTCLTMQEVFSQHRRACPGLTYHRIPMPDF
CAPREEDFDQLLEALRAALSKDPGTGFVFSCLSGQGRTTTAMVVAVLAFWHIQGFPEVGEEELVSVPDAK
FTKGEFQVVMKVVQLLPDGHRVKKEVDAALDTVSETMTPMHYHLREIIICTYRQAKAAKEAQEMRRLQLR
SLQYLERYVCLILFNAYLHLEKADSWQRPFSTWMQEVASKAGIYEILNELGFPELESGEDQPFSRLRYRW
QEQSCSLEPSAPEDLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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