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Report for CCDS11742.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11742.1 Public Homo sapiens 17 UBALD2 24 110 108 CCDS HistoryNCBI Gene:283991Re-query CCDS DB by CCDS ID:11742.1Re-query CCDS DB by GeneID:283991See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11742.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000327490.8 ENSP00000331298.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000327490.8Link to Ensembl Protein Viewer:ENSP00000331298.6Re-query CCDS DB by Nucleotide ID:ENST00000327490Re-query CCDS DB by Protein ID:ENSP00000331298
Original member Current member NCBI NM_182565.4 NP_872371.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182565.4Link to Protein Sequence:NP_872371.1Re-query CCDS DB by Nucleotide ID:NM_182565Re-query CCDS DB by Protein ID:NP_872371Link to BLAST:NP_872371.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_872371.1 164 Q8IYN6 164 100% 0 0

Chromosomal Locations for CCDS 11742.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 76265506 76265625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76265907 76265969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76270194 76270505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (495 nt):
ATGTCGGTGAACATGGACGAGCTGCGGCACCAGGTCATGATCAACCAGTTCGTGCTGGCCGCGGGCTGCG
CGGCCGACCAGGCGAAGCAGTTGCTGCAGGCGGCCCACTGGCAGTTCGAGACCGCGCTGAGCACGTTCTT
CCAAGAAACCAACATTCCCAACAGCCACCACCACCACCAGATGATGTGCACTCCCAGCAACACCCCTGCC
ACGCCGCCCAACTTCCCCGATGCGCTGGCCATGTTCTCCAAGCTCCGCGCCTCCGAGGGCCTGCAGAGCA
GCAACAGCCCCATGACAGCCGCAGCCTGCTCCCCACCTGCAAACTTCAGCCCCTTCTGGGCCTCGTCCCC
GCCCAGCCACCAGGCGCCCTGGATCCCGCCCTCCTCCCCCACCACCTTCCACCACCTCCACCGCCCACAG
CCCACGTGGCCCCCAGGAGCACAGCAGGGGGGCGCCCAGCAGAAAGCCATGGCGGCCATGGACGGCCAGA
GATGA

Translation (164 aa):
MSVNMDELRHQVMINQFVLAAGCAADQAKQLLQAAHWQFETALSTFFQETNIPNSHHHHQMMCTPSNTPA
TPPNFPDALAMFSKLRASEGLQSSNSPMTAAACSPPANFSPFWASSPPSHQAPWIPPSSPTTFHHLHRPQ
PTWPPGAQQGGAQQKAMAAMDGQR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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