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Report for CCDS45774.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45774.1 Public Homo sapiens 17 SUMO2 24 110 108 CCDS HistoryNCBI Gene:6613Re-query CCDS DB by CCDS ID:45774.1Re-query CCDS DB by GeneID:6613See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45774.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000420826.7 ENSP00000405965.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000420826.7Link to Ensembl Protein Viewer:ENSP00000405965.2Re-query CCDS DB by Nucleotide ID:ENST00000420826Re-query CCDS DB by Protein ID:ENSP00000405965
Original member Current member NCBI NM_006937.4 NP_008868.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006937.4Link to Protein Sequence:NP_008868.3Re-query CCDS DB by Nucleotide ID:NM_006937Re-query CCDS DB by Protein ID:NP_008868Link to BLAST:NP_008868.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_008868.3 95 P61956-1 95 100% 0 0

Chromosomal Locations for CCDS 45774.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 75168339 75168401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75174752 75174823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75181057 75181188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75182814 75182834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (288 nt):
ATGGCCGACGAAAAGCCCAAGGAAGGAGTCAAGACTGAGAACAACGATCATATTAATTTGAAGGTGGCGG
GGCAGGATGGTTCTGTGGTGCAGTTTAAGATTAAGAGGCATACACCACTTAGTAAACTAATGAAAGCCTA
TTGTGAACGACAGGGATTGTCAATGAGGCAGATCAGATTCCGATTTGACGGGCAACCAATCAATGAAACA
GACACACCTGCACAGTTGGAAATGGAGGATGAAGATACAATTGATGTGTTCCAACAGCAGACGGGAGGTG
TCTACTGA

Translation (95 aa):
MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINET
DTPAQLEMEDEDTIDVFQQQTGGVY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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