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Report for CCDS3284.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3284.1 Public Homo sapiens 3 ADIPOQ 24 110 108 CCDS HistoryNCBI Gene:9370Re-query CCDS DB by CCDS ID:3284.1Re-query CCDS DB by GeneID:9370See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3284.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000320741.7 ENSP00000320709.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000320741.7Link to Ensembl Protein Viewer:ENSP00000320709.2Re-query CCDS DB by Nucleotide ID:ENST00000320741Re-query CCDS DB by Protein ID:ENSP00000320709
Original member Current member EBI ENST00000444204.2 ENSP00000389814.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000444204.2Link to Ensembl Protein Viewer:ENSP00000389814.2Re-query CCDS DB by Nucleotide ID:ENST00000444204Re-query CCDS DB by Protein ID:ENSP00000389814
Original member Current member NCBI NM_001177800.2 NP_001171271.1 Accepted alive Link to Nucleotide Sequence:NM_001177800.2Link to Protein Sequence:NP_001171271.1Re-query CCDS DB by Nucleotide ID:NM_001177800Re-query CCDS DB by Protein ID:NP_001171271Link to BLAST:NP_001171271.1
Original member Current member NCBI NM_004797.4 NP_004788.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004797.4Link to Protein Sequence:NP_004788.1Re-query CCDS DB by Nucleotide ID:NM_004797Re-query CCDS DB by Protein ID:NP_004788Link to BLAST:NP_004788.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171271.1 244 Q15848 244 100% 0 0
NP_004788.1 244 Q15848 244 100% 0 0

Chromosomal Locations for CCDS 3284.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 186853059 186853272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 186854184 186854704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (735 nt):
ATGCTGTTGCTGGGAGCTGTTCTACTGCTATTAGCTCTGCCCGGTCATGACCAGGAAACCACGACTCAAG
GGCCCGGAGTCCTGCTTCCCCTGCCCAAGGGGGCCTGCACAGGTTGGATGGCGGGCATCCCAGGGCATCC
GGGCCATAATGGGGCCCCAGGCCGTGATGGCAGAGATGGCACCCCTGGTGAGAAGGGTGAGAAAGGAGAT
CCAGGTCTTATTGGTCCTAAGGGAGACATCGGTGAAACCGGAGTACCCGGGGCTGAAGGTCCCCGAGGCT
TTCCGGGAATCCAAGGCAGGAAAGGAGAACCTGGAGAAGGTGCCTATGTATACCGCTCAGCATTCAGTGT
GGGATTGGAGACTTACGTTACTATCCCCAACATGCCCATTCGCTTTACCAAGATCTTCTACAATCAGCAA
AACCACTATGATGGCTCCACTGGTAAATTCCACTGCAACATTCCTGGGCTGTACTACTTTGCCTACCACA
TCACAGTCTATATGAAGGATGTGAAGGTCAGCCTCTTCAAGAAGGACAAGGCTATGCTCTTCACCTATGA
TCAGTACCAGGAAAATAATGTGGACCAGGCCTCCGGCTCTGTGCTCCTGCATCTGGAGGTGGGCGACCAA
GTCTGGCTCCAGGTGTATGGGGAAGGAGAGCGTAATGGACTCTATGCTGATAATGACAATGACTCCACCT
TCACAGGCTTTCTTCTCTACCATGACACCAACTGA

Translation (244 aa):
MLLLGAVLLLLALPGHDQETTTQGPGVLLPLPKGACTGWMAGIPGHPGHNGAPGRDGRDGTPGEKGEKGD
PGLIGPKGDIGETGVPGAEGPRGFPGIQGRKGEPGEGAYVYRSAFSVGLETYVTIPNMPIRFTKIFYNQQ
NHYDGSTGKFHCNIPGLYYFAYHITVYMKDVKVSLFKKDKAMLFTYDQYQENNVDQASGSVLLHLEVGDQ
VWLQVYGEGERNGLYADNDNDSTFTGFLLYHDTN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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