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Report for CCDS34384.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34384.1 Public Homo sapiens 6 MDC1 24 110 108 CCDS HistoryNCBI Gene:9656Re-query CCDS DB by CCDS ID:34384.1Re-query CCDS DB by GeneID:9656See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34384.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376406.8 ENSP00000365588.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000376406.8Link to Ensembl Protein Viewer:ENSP00000365588.3Re-query CCDS DB by Nucleotide ID:ENST00000376406Re-query CCDS DB by Protein ID:ENSP00000365588
Original member Current member NCBI NM_014641.3 NP_055456.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014641.3Link to Protein Sequence:NP_055456.2Re-query CCDS DB by Nucleotide ID:NM_014641Re-query CCDS DB by Protein ID:NP_055456Link to BLAST:NP_055456.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055456.2 2089 Q14676-1 2089 100% 0 0

Chromosomal Locations for CCDS 34384.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 30700465 30700632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30702553 30702663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30702752 30702877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30703104 30703286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30703418 30703537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30703621 30706098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30707384 30707454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30707566 30708357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30711412 30711504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30711667 30711726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30711874 30713354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30713648 30713717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30713803 30714183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30715040 30715175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (6270 nt):
ATGGAGGACACCCAGGCTATTGACTGGGATGTTGAAGAAGAGGAGGAGACAGAGCAATCCAGTGAATCCT
TGAGGTGTAACGTGGAGCCAGTAGGGCGGCTACATATCTTTAGTGGTGCCCATGGACCAGAAAAAGATTT
CCCACTACACCTCGGGAAGAATGTGGTAGGCCGAATGCCTGACTGCTCTGTGGCCCTGCCCTTTCCATCT
ATCTCCAAACAACATGCAGAGATTGAAATCTTAGCCTGGGACAAGGCACCTATCCTCCGAGACTGTGGGA
GCCTTAATGGTACTCAAATCCTGAGACCTCCTAAGGTTTTGAGCCCTGGGGTGAGTCACCGTCTGAGGGA
CCAGGAATTGATTCTCTTTGCTGACTTGCTCTGCCAGTACCATCGCCTGGATGTCTCTCTGCCCTTTGTC
TCCCGGGGCCCTCTGACAGTAGAAGAGACACCCAGAGTACAGGGAGAAACTCAACCCCAGAGGCTTCTGT
TGGCTGAGGACTCGGAGGAGGAAGTAGATTTTCTTTCTGAAAGGCGTATGGTAAAAAAATCAAGGACCAC
ATCTTCCTCTGTGATAGTTCCAGAGAGTGATGAAGAGGGGCATTCCCCGGTCCTGGGCGGCCTTGGGCCG
CCTTTTGCCTTCAATTTGAACAGTGACACAGATGTGGAAGAAGGTCAGCAACCAGCCACAGAGGAGGCCT
CCTCAGCTGCCAGAAGAGGTGCCACTGTAGAGGCAAAGCAGTCTGAAGCTGAAGTTGTAACTGAAATCCA
GCTTGAAAAGGATCAGCCTTTAGTGAAGGAGAGGGACAATGATACAAAAGTCAAGAGGGGTGCAGGGAAT
GGGGTGGTTCCAGCTGGGGTGATTCTGGAGAGGAGCCAACCTCCTGGAGAGGACAGTGACACAGATGTGG
ATGATGACAGCAGGCCTCCTGGAAGGCCAGCTGAGGTCCATTTGGAAAGGGCTCAGCCTTTTGGCTTCAT
CGACAGCGACACTGATGCGGAAGAAGAGAGGATCCCAGCAACCCCAGTTGTCATTCCTATGAAGAAGAGG
AAGATCTTCCATGGAGTAGGTACAAGGGGTCCTGGAGCACCAGGCCTGGCCCATCTGCAGGAGAGCCAGG
CTGGTAGTGATACAGATGTGGAAGAAGGCAAGGCCCCACAGGCTGTCCCTCTGGAGAAAAGCCAAGCTTC
CATGGTTATCAACAGCGATACAGATGACGAGGAAGAAGTCTCAGCAGCGCTGACTTTGGCACATCTGAAA
GAGAGCCAGCCTGCTATATGGAACAGAGATGCAGAAGAGGACATGCCCCAACGTGTGGTCCTTCTGCAGC
GAAGCCAAACCACCACTGAGAGAGACAGTGACACAGACGTGGAGGAGGAAGAGCTCCCAGTGGAAAATAG
AGAAGCTGTCCTCAAGGATCACACAAAGATTAGAGCCCTTGTTAGAGCACATTCAGAAAAGGACCAACCT
CCTTTTGGGGACAGTGATGACAGTGTGGAAGCAGATAAGAGCTCACCTGGGATCCACCTGGAGAGAAGCC
AAGCCTCCACCACAGTGGACATCAACACACAAGTGGAGAAGGAAGTCCCGCCAGGGTCAGCCATTATACA
TATAAAGAAGCATCAGGTGTCTGTGGAGGGGACAAATCAAACAGATGTGAAAGCAGTTGGGGGACCAGCA
AAGCTGCTTGTGGTATCTCTAGAGGAAGCCTGGCCTCTGCATGGGGACTGTGAAACAGATGCAGAGGAGG
GCACCTCCCTAACAGCCTCAGTAGTTGCAGATGTAAGAAAGAGCCAGCTTCCAGCAGAAGGGGATGCTGG
GGCAGAGTGGGCTGCAGCTGTTCTTAAGCAGGAGAGAGCTCATGAGGTGGGGGCCCAGGGTGGGCCACCT
GTGGCACAAGTGGAGCAGGACCTCCCTATCTCAAGAGAGAACCTCACAGATCTGGTGGTGGACACAGACA
CTCTAGGGGAATCCACCCAGCCACAGAGAGAGGGAGCCCAGGTCCCCACAGGAAGGGAGAGAGAACAACA
TGTGGGTGGGACCAAGGACTCTGAAGACAACTATGGTGATTCTGAAGATCTGGACCTACAAGCTACCCAG
TGCTTTCTGGAGAATCAGGGCCTGGAAGCAGTCCAGAGCATGGAGGATGAACCTACCCAGGCCTTCATGT
TGACTCCACCCCAAGAGCTTGGCCCTTCCCATTGCAGCTTCCAGACAACAGGTACCCTAGATGAACCATG
GGAGGTCCTGGCTACACAGCCATTCTGTCTGAGAGAGTCTGAGGACTCTGAGACCCAGCCTTTTGACACG
CACCTTGAGGCCTATGGACCTTGCCTGTCTCCACCTAGGGCAATACCAGGAGACCAACATCCAGAGAGCC
CAGTTCACACAGAGCCAATGGGGATTCAAGGCAGAGGGAGGCAGACTGTGGATAAAGTCATGGGTATACC
AAAAGAAACAGCAGAGAGGGTGGGCCCTGAGAGAGGGCCATTGGAGAGAGAAACTGAGAAACTGCTACCA
GAAAGACAGACAGATGTGACAGGAGAGGAAGAATTAACCAAGGGGAAACAGGACAGAGAACAAAAACAGT
TGTTAGCTAGAGACACCCAGAGACAAGAATCTGACAAAAATGGGGAAAGTGCAAGTCCTGAAAGAGATAG
GGAGAGTTTGAAGGTAGAAATTGAGACATCTGAGGAAATACAAGAGAAACAAGTACAGAAGCAGACCCTT
CCAAGCAAAGCATTTGAGAGAGAAGTAGAGAGACCAGTAGCAAACAGAGAGTGCGATCCAGCCGAGTTAG
AAGAGAAGGTGCCCAAAGTGATCCTGGAGAGAGATACACAGAGAGGGGAGCCAGAGGGAGGGAGCCAGGA
CCAGAAAGGGCAGGCCTCCAGCCCAACACCAGAGCCTGGGGTGGGGGCGGGGGACCTTCCGGGACCTACC
TCAGCCCCCGTACCTTCTGGGAGCCAGTCAGGTGGAAGGGGATCCCCAGTGAGCCCCAGGAGGCATCAGA
AAGGCCTCCTGAATTGCAAGATGCCACCTGCTGAGAAGGCTTCCAGGATCAGAGCTGCTGAGAAGGTTTC
CAGGGGCGATCAGGAATCTCCAGATGCTTGTCTGCCTCCTACAGTACCTGAAGCCCCAGCCCCACCCCAA
AAGCCCCTTAACTCTCAGAGCCAGAAACATCTTGCACCTCCGCCCCTTCTTTCTCCCCTTTTACCTTCTA
TCAAGCCAACCGTTCGTAAGACCAGGCAAGATGGGAGTCAGGAAGCTCCAGAGGCTCCCTTGTCCTCAGA
GCTGGAGCCTTTCCACCCAAAGCCTAAAATTAGAACTCGGAAGTCCTCCAGAATGACACCCTTTCCAGCT
ACCTCTGCTGCCCCTGAGCCCCACCCTTCCACCTCCACAGCCCAGCCAGTCACTCCCAAGCCCACATCTC
AGGCCACTAGGAGCAGGACAAATAGGTCCTCTGTCAAGACCCCTGAACCAGTTGTCCCCACAGCCCCTGA
GCTCCAGCCTTCCACCTCCACAGACCAGCCTGTCACCTCTGAGCCCACATCTCAGGTTACTAGGGGAAGA
AAAAGTAGATCCTCTGTCAAGACCCCTGAAACAGTTGTGCCCACAGCCCTTGAGCTCCAGCCTTCCACCT
CCACCGACCGACCTGTCACCTCTGAACCCACCTCTCAGGCTACTAGGGGAAGAAAAAATAGATCCTCTGT
CAAGACCCCTGAACCAGTTGTCCCCACAGCCCCTGAGCTCCAGCCTTCCACCTCCACAGACCAGCCTGTC
ACTTCTGAGCCCACATATCAGGCTACTAGGGGAAGAAAAAATAGATCCTCTGTCAAGACCCCTGAACCAG
TTGTGCCCACAGCCCCTGAGCTCCGGCCTTCCACCTCCACAGACCGACCTGTCACCCCCAAGCCCACATC
TCGGACCACTAGGAGCAGGACAAATATGTCCTCTGTCAAGACCCCTGAAACAGTTGTCCCCACAGCCCCT
GAGCTCCAGATTTCCACCTCCACAGACCAACCTGTCACCCCTAAGCCCACATCTCGGACCACTAGGAGCA
GGACAAATATGTCCTCTGTGAAGAACCCTGAATCAACTGTCCCTATAGCCCCTGAGCTCCCACCTTCCAC
CTCCACAGAGCAGCCTGTCACCCCTGAGCCCACATCTCGGGCTACTAGGGGAAGAAAAAATAGATCCTCT
GGCAAGACCCCTGAAACACTTGTCCCCACAGCCCCTAAGCTCGAGCCTTCCACTTCCACAGACCAACCTG
TCACTCCTGAGCCCACATCTCAGGCCACCAGGGGCAGGACAAATAGGTCCTCTGTGAAGACCCCTGAAAC
AGTTGTCCCCACAGCCCCTGAGCTCCAGCCTTCCACCTCCACAGACCAGCCTGTTACCCCTGAGCCTACG
TCTCAGGCTACTAGGGGAAGAACAGATAGATCCTCTGTCAAGACTCCTGAAACAGTTGTCCCCACAGCCC
CTGAGCTACAGGCTTCCGCCTCCACAGACCAGCCTGTCACCTCTGAGCCCACATCTCGGACCACTAGGGG
AAGAAAAAATCGGTCCTCTGTCAAGACCCCTGAAACAGTTGTGCCCGCAGCCCCTGAGCTCCAGCCTTCC
ACCTCCACAGACCAACCTGTCACCCCTGAGCCCACATCTCGGGCCACTAGGGGCAGGACAAATAGGTCCT
CTGTCAAGACCCCTGAATCAATTGTCCCTATAGCCCCTGAGCTTCAGCCTTCCACCTCCAGAAACCAGCT
TGTCACCCCTGAGCCCACATCTCGGGCCACTAGGTGCAGGACAAATAGGTCCTCTGTCAAGACCCCTGAG
CCAGTTGTCCCCACAGCCCCTGAGCCCCATCCTACCACCTCCACAGACCAGCCTGTCACCCCCAAGCTCA
CATCTAGGGCCACTAGGAGAAAGACAAATAGGTCCTCTGTCAAGACTCCCAAACCAGTTGAACCAGCAGC
CTCTGATCTTGAGCCTTTTACCCCCACAGACCAGTCCGTCACCCCTGAGGCCATAGCTCAGGGTGGTCAG
AGCAAAACACTGAGGTCTTCCACAGTAAGAGCTATGCCGGTTCCTACCACCCCTGAATTCCAATCTCCTG
TCACCACAGACCAGCCTATTTCCCCTGAGCCTATTACTCAACCCAGTTGCATCAAGAGGCAGAGAGCCGC
TGGGAACCCTGGCTCCCTCGCAGCTCCCATTGACCATAAGCCTTGCTCTGCACCCTTGGAACCTAAATCC
CAGGCCTCAAGGAACCAAAGATGGGGAGCAGTGAGAGCAGCTGAATCCCTTACAGCCATTCCTGAGCCTG
CCTCTCCCCAGCTTCTTGAGACACCAATTCATGCCTCCCAGATCCAAAAGGTGGAACCAGCAGGTAGATC
TAGGTTCACCCCGGAGCTCCAGCCTAAGGCCTCTCAAAGCCGCAAGAGGTCTTTAGCTACCATGGATTCA
CCACCACATCAAAAACAGCCCCAAAGAGGGGAAGTCTCCCAGAAGACAGTGATTATCAAGGAAGAGGAAG
AAGATACTGCAGAGAAGCCAGGGAAGGAAGAGGATGTCGTGACTCCAAAACCAGGCAAGAGAAAGAGAGA
CCAGGCAGAGGAGGAGCCCAACAGAATACCAAGCCGCAGCCTCCGACGGACCAAACTTAACCAAGAATCA
ACAGCCCCCAAAGTGCTCTTCACAGGAGTGGTGGATGCTCGGGGAGAGCGGGCTGTGCTGGCACTGGGGG
GAAGTCTGGCTGGTTCAGCGGCAGAGGCTTCCCACCTGGTCACTGATCGCATCCGCCGGACAGTCAAGTT
CCTGTGTGCCCTGGGGCGGGGAATCCCCATTCTGTCCCTGGACTGGCTGCATCAGTCCCGCAAGGCTGGT
TTCTTCTTACCCCCGGATGAATATGTGGTGACCGACCCTGAGCAAGAGAAGAACTTTGGCTTTAGCCTTC
AAGACGCACTGAGCAGGGCTCGGGAGCGAAGGCTGCTAGAGGGCTATGAGATCTATGTGACCCCTGGAGT
CCAGCCACCACCACCTCAGATGGGAGAGATTATTAGCTGCTGTGGAGGCACATACCTACCCAGCATGCCT
CGGTCCTATAAGCCTCAGAGAGTTGTGATCACATGCCCTCAGGACTTCCCTCATTGCTCCATTCCACTAC
GGGTTGGGCTGCCCCTCCTCTCGCCTGAGTTCCTGCTGACTGGAGTGCTGAAGCAGGAAGCCAAGCCAGA
GGCCTTTGTCCTCTCCCCTTTGGAGATGTCATCCACCTGA

Translation (2089 aa):
MEDTQAIDWDVEEEEETEQSSESLRCNVEPVGRLHIFSGAHGPEKDFPLHLGKNVVGRMPDCSVALPFPS
ISKQHAEIEILAWDKAPILRDCGSLNGTQILRPPKVLSPGVSHRLRDQELILFADLLCQYHRLDVSLPFV
SRGPLTVEETPRVQGETQPQRLLLAEDSEEEVDFLSERRMVKKSRTTSSSVIVPESDEEGHSPVLGGLGP
PFAFNLNSDTDVEEGQQPATEEASSAARRGATVEAKQSEAEVVTEIQLEKDQPLVKERDNDTKVKRGAGN
GVVPAGVILERSQPPGEDSDTDVDDDSRPPGRPAEVHLERAQPFGFIDSDTDAEEERIPATPVVIPMKKR
KIFHGVGTRGPGAPGLAHLQESQAGSDTDVEEGKAPQAVPLEKSQASMVINSDTDDEEEVSAALTLAHLK
ESQPAIWNRDAEEDMPQRVVLLQRSQTTTERDSDTDVEEEELPVENREAVLKDHTKIRALVRAHSEKDQP
PFGDSDDSVEADKSSPGIHLERSQASTTVDINTQVEKEVPPGSAIIHIKKHQVSVEGTNQTDVKAVGGPA
KLLVVSLEEAWPLHGDCETDAEEGTSLTASVVADVRKSQLPAEGDAGAEWAAAVLKQERAHEVGAQGGPP
VAQVEQDLPISRENLTDLVVDTDTLGESTQPQREGAQVPTGREREQHVGGTKDSEDNYGDSEDLDLQATQ
CFLENQGLEAVQSMEDEPTQAFMLTPPQELGPSHCSFQTTGTLDEPWEVLATQPFCLRESEDSETQPFDT
HLEAYGPCLSPPRAIPGDQHPESPVHTEPMGIQGRGRQTVDKVMGIPKETAERVGPERGPLERETEKLLP
ERQTDVTGEEELTKGKQDREQKQLLARDTQRQESDKNGESASPERDRESLKVEIETSEEIQEKQVQKQTL
PSKAFEREVERPVANRECDPAELEEKVPKVILERDTQRGEPEGGSQDQKGQASSPTPEPGVGAGDLPGPT
SAPVPSGSQSGGRGSPVSPRRHQKGLLNCKMPPAEKASRIRAAEKVSRGDQESPDACLPPTVPEAPAPPQ
KPLNSQSQKHLAPPPLLSPLLPSIKPTVRKTRQDGSQEAPEAPLSSELEPFHPKPKIRTRKSSRMTPFPA
TSAAPEPHPSTSTAQPVTPKPTSQATRSRTNRSSVKTPEPVVPTAPELQPSTSTDQPVTSEPTSQVTRGR
KSRSSVKTPETVVPTALELQPSTSTDRPVTSEPTSQATRGRKNRSSVKTPEPVVPTAPELQPSTSTDQPV
TSEPTYQATRGRKNRSSVKTPEPVVPTAPELRPSTSTDRPVTPKPTSRTTRSRTNMSSVKTPETVVPTAP
ELQISTSTDQPVTPKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRATRGRKNRSS
GKTPETLVPTAPKLEPSTSTDQPVTPEPTSQATRGRTNRSSVKTPETVVPTAPELQPSTSTDQPVTPEPT
SQATRGRTDRSSVKTPETVVPTAPELQASASTDQPVTSEPTSRTTRGRKNRSSVKTPETVVPAAPELQPS
TSTDQPVTPEPTSRATRGRTNRSSVKTPESIVPIAPELQPSTSRNQLVTPEPTSRATRCRTNRSSVKTPE
PVVPTAPEPHPTTSTDQPVTPKLTSRATRRKTNRSSVKTPKPVEPAASDLEPFTPTDQSVTPEAIAQGGQ
SKTLRSSTVRAMPVPTTPEFQSPVTTDQPISPEPITQPSCIKRQRAAGNPGSLAAPIDHKPCSAPLEPKS
QASRNQRWGAVRAAESLTAIPEPASPQLLETPIHASQIQKVEPAGRSRFTPELQPKASQSRKRSLATMDS
PPHQKQPQRGEVSQKTVIIKEEEEDTAEKPGKEEDVVTPKPGKRKRDQAEEEPNRIPSRSLRRTKLNQES
TAPKVLFTGVVDARGERAVLALGGSLAGSAAEASHLVTDRIRRTVKFLCALGRGIPILSLDWLHQSRKAG
FFLPPDEYVVTDPEQEKNFGFSLQDALSRARERRLLEGYEIYVTPGVQPPPPQMGEIISCCGGTYLPSMP
RSYKPQRVVITCPQDFPHCSIPLRVGLPLLSPEFLLTGVLKQEAKPEAFVLSPLEMSST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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