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Report for CCDS7334.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7334.1 Public Homo sapiens 10 CHCHD1 24 110 108 CCDS HistoryNCBI Gene:118487Re-query CCDS DB by CCDS ID:7334.1Re-query CCDS DB by GeneID:118487See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7334.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372833.6 ENSP00000361923.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372833.6Link to Ensembl Protein Viewer:ENSP00000361923.5Re-query CCDS DB by Nucleotide ID:ENST00000372833Re-query CCDS DB by Protein ID:ENSP00000361923
Original member Current member NCBI NM_203298.3 NP_976043.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_203298.3Link to Protein Sequence:NP_976043.1Re-query CCDS DB by Nucleotide ID:NM_203298Re-query CCDS DB by Protein ID:NP_976043Link to BLAST:NP_976043.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_976043.1 118 Q96BP2 118 100% 0 0

Chromosomal Locations for CCDS 7334.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 73782076 73782199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73782323 73782441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73783074 73783187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (357 nt):
ATGGCGACACCCAGCCTGCGGGGTCGTCTGGCGCGGTTTGGGAACCCGCGGAAGCCTGTGCTGAAGCCCA
ATAAACCTCTCATTCTAGCTAACCGCGTCGGGGAGCGGCGCCGGGAGAAGGGCGAGGCGACTTGCATCAC
GGAGATGTCGGTGATGATGGCTTGCTGGAAGCAGAATGAATTCCGCGACGATGCGTGCAGAAAAGAGATC
CAGGGCTTCCTCGATTGTGCCGCGAGGGCTCAGGAAGCCCGAAAGATGAGATCAATACAGGAAACCCTGG
GAGAGTCTGGGAGTTTACTTCCAAATAAATTGAATAAGTTGTTACAGAGGTTTCCTAACAAACCTTACCT
CAGCTGA

Translation (118 aa):
MATPSLRGRLARFGNPRKPVLKPNKPLILANRVGERRREKGEATCITEMSVMMACWKQNEFRDDACRKEI
QGFLDCAARAQEARKMRSIQETLGESGSLLPNKLNKLLQRFPNKPYLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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