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Report for CCDS43656.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43656.1 Public Homo sapiens 7 LUC7L2 24 110 108 CCDS HistoryNCBI Gene:51631Re-query CCDS DB by CCDS ID:43656.1Re-query CCDS DB by GeneID:51631See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43656.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354926.9 ENSP00000347005.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000354926.9Link to Ensembl Protein Viewer:ENSP00000347005.4Re-query CCDS DB by Nucleotide ID:ENST00000354926Re-query CCDS DB by Protein ID:ENSP00000347005
Original member Current member NCBI NM_016019.5 NP_057103.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016019.5Link to Protein Sequence:NP_057103.2Re-query CCDS DB by Nucleotide ID:NM_016019Re-query CCDS DB by Protein ID:NP_057103Link to BLAST:NP_057103.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057103.2 392 Q9Y383-1 392 100% 0 0

Chromosomal Locations for CCDS 43656.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 139360262 139360322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139376062 139376156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139398599 139398697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139402137 139402247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139405644 139405787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139407174 139407350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139409563 139409654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139412551 139412580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139417538 139417729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139422163 139422340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1179 nt):
ATGTCGGCGCAGGCCCAGATGCGCGCGATGCTGGACCAGTTGATGGGCACCTCCCGGGACGGAGATACAA
CTCGTCAACGAATCAAATTCAGTGATGACAGAGTATGCAAGAGTCACCTTCTCAACTGTTGTCCTCATGA
TGTCCTTTCTGGAACTAGAATGGATCTTGGAGAATGTCTGAAAGTCCATGACCTGGCTTTAAGAGCGGAT
TATGAAATTGCATCCAAAGAACAAGATTTTTTCTTTGAACTTGATGCCATGGATCATCTGCAGTCATTCA
TTGCAGATTGTGATCGTAGAACAGAAGTGGCCAAGAAAAGATTAGCAGAAACTCAAGAAGAGATTAGTGC
TGAAGTAGCAGCAAAGGCAGAACGTGTTCATGAGTTAAATGAAGAAATTGGTAAATTGTTAGCCAAGGTG
GAACAACTAGGAGCTGAAGGGAATGTGGAGGAATCCCAGAAAGTAATGGATGAAGTAGAGAAAGCACGGG
CAAAGAAAAGAGAAGCAGAGGAAGTTTATCGGAATTCTATGCCAGCTTCCAGTTTTCAGCAGCAGAAACT
TCGAGTCTGTGAAGTCTGCTCTGCCTATTTAGGACTTCATGATAATGACAGACGACTGGCTGATCATTTT
GGGGGTAAACTGCACCTGGGATTTATTGAAATAAGAGAGAAGCTTGAAGAATTAAAGAGAGTCGTAGCTG
AGAAGCAGGAGAAAAGAAACCAGGAACGGCTGAAACGAAGAGAAGAGAGAGAGAGAGAAGAAAGGGAGAA
GCTGAGGAGGTCCCGATCACACAGCAAGAATCCAAAAAGATCCAGGTCCAGAGAGCATCGCAGACATCGA
TCTCGCTCCATGTCACGTGAACGCAAGAGGAGAACTCGATCCAAATCTCGGGAGAAACGCCATCGCCACA
GGTCCCGCTCCAGCAGCCGTAGCCGCAGCCGTAGCCACCAGAGAAGTCGGCACAGTTCTAGAGATAGGAG
CAGAGAACGATCCAAGAGGAGATCCTCAAAAGAAAGATTCAGAGACCAAGACTTAGCATCATGTGACAGA
GACAGGAGTTCAAGAGACAGATCACCTCGTGACAGAGATCGGAAAGATAAGAAGCGGTCCTATGAGAGTG
CTAATGGCAGATCAGAAGACAGGAGGAGCTCTGAAGAGCGCGAAGCAGGGGAGATCTAA

Translation (392 aa):
MSAQAQMRAMLDQLMGTSRDGDTTRQRIKFSDDRVCKSHLLNCCPHDVLSGTRMDLGECLKVHDLALRAD
YEIASKEQDFFFELDAMDHLQSFIADCDRRTEVAKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKV
EQLGAEGNVEESQKVMDEVEKARAKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHF
GGKLHLGFIEIREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHR
SRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDR
DRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEEREAGEI


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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