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Report for CCDS30650.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30650.1 Public Homo sapiens 1 ZDHHC18 24 110 108 CCDS HistoryNCBI Gene:84243Re-query CCDS DB by CCDS ID:30650.1Re-query CCDS DB by GeneID:84243See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30650.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374142.9 ENSP00000363257.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000374142.9Link to Ensembl Protein Viewer:ENSP00000363257.3Re-query CCDS DB by Nucleotide ID:ENST00000374142Re-query CCDS DB by Protein ID:ENSP00000363257
Original member Current member NCBI NM_032283.3 NP_115659.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032283.3Link to Protein Sequence:NP_115659.1Re-query CCDS DB by Nucleotide ID:NM_032283Re-query CCDS DB by Protein ID:NP_115659Link to BLAST:NP_115659.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115659.1 388 Q9NUE0-1 388 100% 0 0

Chromosomal Locations for CCDS 30650.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 26826805 26827139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26832447 26832607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26848608 26848757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26850301 26850438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26850558 26850606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26851129 26851231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26852753 26852865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26853726 26853843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1167 nt):
ATGAAGGACTGCGAGTACCAGCAGATCAGCCCCGGGGCCGCCCCGCTGCCCGCCTCCCCGGGGGCGCGCC
GTCCCGGCCCCGCCGCGTCCCCGACTCCGGGCCCCGGGCCCGCGCCGCCCGCCGCCCCCGCCCCGCCGCG
CTGGAGCAGCAGCGGCAGCGGCAGCGGCAGCGGGAGCGGGAGCCTCGGCCGCCGCCCACGGCGCAAGTGG
GAGGTGTTCCCGGGTCGCAATCGCTTCTACTGCGGCGGCCGCCTCATGCTGGCCGGCCACGGCGGCGTCT
TCGCGCTCACGCTGCTGCTCATCCTCACCACCACCGGCCTCTTCTTCGTCTTTGACTGTCCCTACCTGGC
TCGCAAGCTGACCCTTGCCATCCCCATCATCGCTGCCATCCTCTTCTTCTTCGTCATGAGCTGCCTGCTG
CAGACAAGCTTCACCGACCCTGGGATCCTGCCCCGGGCCACTGTCTGTGAAGCAGCCGCCCTGGAGAAAC
AGATCGACAACACAGGCAGTTCTACATACCGGCCACCCCCTCGGACCCGGGAGGTGCTGATCAACGGGCA
GATGGTGAAGCTGAAGTACTGCTTCACCTGCAAGATGTTCCGGCCACCCCGAACCTCACACTGCAGTGTC
TGCGACAACTGTGTGGAACGATTTGACCATCACTGCCCCTGGGTGGGCAACTGTGTGGGGAGACGGAACT
ATCGCTTCTTCTACGCGTTTATTCTCTCCCTCTCATTCCTGACGGCCTTCATCTTCGCCTGTGTGGTCAC
CCACCTGACGTTGCGCGCTCAGGGAAGCAACTTCCTCTCCACTCTGAAGGAGACACCAGCAAGCGTGCTG
GAGTTGGTGATCTGCTTCTTCTCCATCTGGTCCATTCTGGGCCTCTCAGGGTTTCACACGTACCTCGTCG
CCTCCAACCTGACTACTAATGAAGACATCAAAGGCTCGTGGTCCAGCAAGAGGGGCGGTGAGGCCTCTGT
CAACCCCTACAGCCATAAAAGTATTATCACCAACTGCTGTGCTGTGCTCTGTGGCCCCCTACCTCCCAGC
CTAATTGACCGGAGGGGATTTGTGCAGTCCGACACCGTGTTGCCCTCACCCATCAGAAGCGATGAGCCAG
CCTGCAGAGCCAAGCCTGATGCCAGCATGGTAGGAGGCCACCCCTGA

Translation (388 aa):
MKDCEYQQISPGAAPLPASPGARRPGPAASPTPGPGPAPPAAPAPPRWSSSGSGSGSGSGSLGRRPRRKW
EVFPGRNRFYCGGRLMLAGHGGVFALTLLLILTTTGLFFVFDCPYLARKLTLAIPIIAAILFFFVMSCLL
QTSFTDPGILPRATVCEAAALEKQIDNTGSSTYRPPPRTREVLINGQMVKLKYCFTCKMFRPPRTSHCSV
CDNCVERFDHHCPWVGNCVGRRNYRFFYAFILSLSFLTAFIFACVVTHLTLRAQGSNFLSTLKETPASVL
ELVICFFSIWSILGLSGFHTYLVASNLTTNEDIKGSWSSKRGGEASVNPYSHKSIITNCCAVLCGPLPPS
LIDRRGFVQSDTVLPSPIRSDEPACRAKPDASMVGGHP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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