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Report for CCDS44462.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44462.1 Public Homo sapiens 10 CCNJ 24 110 108 CCDS HistoryNCBI Gene:54619Re-query CCDS DB by CCDS ID:44462.1Re-query CCDS DB by GeneID:54619See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44462.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000465148.3 ENSP00000435373.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000465148.3Link to Ensembl Protein Viewer:ENSP00000435373.2Re-query CCDS DB by Nucleotide ID:ENST00000465148Re-query CCDS DB by Protein ID:ENSP00000435373
Original member Current member NCBI NM_001134375.2 NP_001127847.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001134375.2Link to Protein Sequence:NP_001127847.1Re-query CCDS DB by Nucleotide ID:NM_001134375Re-query CCDS DB by Protein ID:NP_001127847Link to BLAST:NP_001127847.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001127847.1 383 Q5T5M9-3 383 100% 0 0

Chromosomal Locations for CCDS 44462.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 96044394 96044462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96050256 96050466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96056701 96057000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96057088 96057247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96057830 96058241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1152 nt):
ATGGAGCTGGAGGGGCAGTGGTGGCGAGGACAGCTGGCCGCCGATATTCACCAAGCGCTTCGCTACAAGG
AGCTGAAGTTGCCCTCCTATAAAGGCCAGTCCCCTCAGTTAAGTCTCAGACGGTATTTTGCTGACTTGAT
TGCCATTGTGAGCAATCGCTTCACACTCTGCCCTTCTGCCCGCCATCTTGCTGTCTATTTACTGGACCTG
TTTATGGACCGCTATGACATCTCTATCCAGCAGCTGCATTTAGTTGCGCTTTCCTGCCTGCTTCTAGCAA
GTAAATTTGAAGAAAAAGAAGACAGTGTGCCTAAGCTGGAGCAGCTCAACAGCCTGGGTTGTATGACTAA
TATGAATCTAGTATTAACAAAACAAAATTTGCTACATATGGAACTATTATTATTAGAAACCTTTCAGTGG
AACCTCTGCCTTCCAACAGCCGCCCATTTCATTGAGTATTATCTCTCTGAAGCAGTACACGAAACAGATC
TTCATGACGGCTGGCCAATGATTTGCTTGGAAAAGACTAAACTCTACATGGCCAAATATGCAGATTACTT
CCTGGAAGTATCTTTGCAAGATTATGCCTTTCTAAATTATGCACCTTCTTTAGTAGCTGCTGCATGTGTG
GCTTCTTCGAGGATTATACTTCGTCTTTCTCCAACGTGGCCTACAAGACTACATCGTCTTACTGCCTACT
CTTGGGATTTCTTAGTGCAGTGTATTGAACGACTGTTGATCGCTCATGATAATGATGTGAAAGAAGCAAA
CAAACAGAGAGGGCAAGCAGGACCTCAGTCAGCGCAACTAAGTGTATTCCAGACAGCCTCCCAGCCATCA
CGGCCAGTTCACTTTCAGCAACCTCAGTATCTCCATCAGACACATCAGACCTCACTGCAGTATCGCCATC
CTACGTCAGAACAACCAAGCTGTCAGCAGATTGTATCGACCACACACACCTCATCTTACACACTACAGAC
ATGTCCTGCTGGCTTCCAAACTAGTGTTCAGGGCCTTGGGCACATGCAGACTGGTGTTGGGATGTCACTG
GCAATACCAGTAGAAGTTAAGCCCTGTCTGAGTGTTTCTTACAACCGGAGTTATCAGATAAATGAACATT
ACCCTTGTATTACTCCATGTTTTGAAAGGTGA

Translation (383 aa):
MELEGQWWRGQLAADIHQALRYKELKLPSYKGQSPQLSLRRYFADLIAIVSNRFTLCPSARHLAVYLLDL
FMDRYDISIQQLHLVALSCLLLASKFEEKEDSVPKLEQLNSLGCMTNMNLVLTKQNLLHMELLLLETFQW
NLCLPTAAHFIEYYLSEAVHETDLHDGWPMICLEKTKLYMAKYADYFLEVSLQDYAFLNYAPSLVAAACV
ASSRIILRLSPTWPTRLHRLTAYSWDFLVQCIERLLIAHDNDVKEANKQRGQAGPQSAQLSVFQTASQPS
RPVHFQQPQYLHQTHQTSLQYRHPTSEQPSCQQIVSTTHTSSYTLQTCPAGFQTSVQGLGHMQTGVGMSL
AIPVEVKPCLSVSYNRSYQINEHYPCITPCFER


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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