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Report for CCDS8503.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8503.1 Public Homo sapiens 12 CCDC77 24 110 108 CCDS HistoryNCBI Gene:84318Re-query CCDS DB by CCDS ID:8503.1Re-query CCDS DB by GeneID:84318See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8503.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000239830.9 ENSP00000239830.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000239830.9Link to Ensembl Protein Viewer:ENSP00000239830.4Re-query CCDS DB by Nucleotide ID:ENST00000239830Re-query CCDS DB by Protein ID:ENSP00000239830
Original member Current member NCBI NM_032358.4 NP_115734.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032358.4Link to Protein Sequence:NP_115734.1Re-query CCDS DB by Nucleotide ID:NM_032358Re-query CCDS DB by Protein ID:NP_115734Link to BLAST:NP_115734.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115734.1 488 Q9BR77-1 488 100% 0 0

Chromosomal Locations for CCDS 8503.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 409384 409421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 411747 411978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 418494 418636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 428769 428865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 430664 430736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 431866 431954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 433174 433322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 438335 438554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 440617 440742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 440844 440996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 441774 441920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1467 nt):
ATGAACTTTACCCCAACACACACCCCTGTCTGCAGAAAGCGAACAGTTGTCTCCAAACGTGGTGTTGCCG
TCAGTGGTCCCACCAAGAGGAGGGGAATGGCAGATTCACTGGAGTCAACCCCCTTGCCTTCCCCCGAAGA
TCGTCTGGCCAAACTCCATCCTTCTAAGGAGCTCCTGGAATATTATCAAAAGAAGATGGCTGAGTGTGAG
GCAGAAAATGAGGACTTGCTGAAGAAACTGGAACTCTACAAAGAAGCTTGTGAAGGACAGCATAAACTTG
AATGTGATTTGCAGCAGAGGGAGGAAGAGATTGCTGAATTGCAGAAAGCTCTAAGTGATATGCAGGTCTG
CCTCTTCCAGGAACGGGAACATGTTTTACGCCTCTACTCAGAAAATGACCGACTGAGAATCAGGGAGCTA
GAAGACAAGAAAAAGATTCAGAATCTCTTGGCTCTTGTGGGAACAGATGCTGGAGAAGTGACCTATTTTT
GTAAGGAGCCTCCTCACAAAGTCACCATTCTCCAAAAGACTATCCAGGCTGTAGGTGAATGTGAGCAGAG
TGAATCTTCAGCTTTCAAAGCAGATCCTAAAATAAGCAAAAGAAGACCATCGAGAGAGAGAAAAGAAAGT
TCTGAGCATTACCAAAGAGACATACAGACACTCATCCTACAGGTGGAAGCACTGCAGGCTCAGCTGGGAG
AGCAGACCAAACTTTCTCGAGAACAAATTGAAGGGCTCATCGAGGACAGACGGATTCACCTTGAGGAAAT
ACAAGTTCAGCACCAGAGAAATCAGAACAAAATCAAAGAGCTAACCAAAAATCTTCACCACACCCAAGAA
CTGCTCTATGAGAGCACCAAAGATTTTCTGCAACTCAGATCTGAAAACCAAAATAAAGAGAAGTCATGGA
TGCTTGAAAAAGATAATTTGATGTCAAAGATTAAGCAATATAGGGTGCAGTGTAAGAAGAAAGAAGATAA
AATTGGAAAAGTGTTGCCCGTTATGCATGAGAGTCACCATGCTCAAAGTGAATATATTAAGTCCCTAAAA
GATAAGTTAGTACAAGAGAAAAAGCTGTCCAATATGTACCAAGAGCAGTGCATTTCCTTAGAAGAAGAAC
TTGCCCGAATTCGTGAGGAAGAGGGAATGAGGAGAGAGATCTTCAAGGATCGCACTAACAAGATGGGGAA
GCGTTTACAGATAATGACAAAACGCTATGAGGCATTGGAGCGTCGACGTATCCTGGAAGTAGAAGGCTTT
AAGACAGATATTAAAGTTCTCCGACAGAAACTGAAAGACTTGGAGCAAATGTTGTATAAGGCAACAGTTA
ATGCCCGGGCAAACCAGGATCTTGCCCTTCTGTGTGAGGTCCGTGACAGCAATAGACGGGCACATAAGAT
ACAAGGAGAACTGAAGAATCTTAAGTCGAAAGTGTTTGGTCTGGAGAATGAACTTAGACTCTGTTAA

Translation (488 aa):
MNFTPTHTPVCRKRTVVSKRGVAVSGPTKRRGMADSLESTPLPSPEDRLAKLHPSKELLEYYQKKMAECE
AENEDLLKKLELYKEACEGQHKLECDLQQREEEIAELQKALSDMQVCLFQEREHVLRLYSENDRLRIREL
EDKKKIQNLLALVGTDAGEVTYFCKEPPHKVTILQKTIQAVGECEQSESSAFKADPKISKRRPSRERKES
SEHYQRDIQTLILQVEALQAQLGEQTKLSREQIEGLIEDRRIHLEEIQVQHQRNQNKIKELTKNLHHTQE
LLYESTKDFLQLRSENQNKEKSWMLEKDNLMSKIKQYRVQCKKKEDKIGKVLPVMHESHHAQSEYIKSLK
DKLVQEKKLSNMYQEQCISLEEELARIREEEGMRREIFKDRTNKMGKRLQIMTKRYEALERRRILEVEGF
KTDIKVLRQKLKDLEQMLYKATVNARANQDLALLCEVRDSNRRAHKIQGELKNLKSKVFGLENELRLC


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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