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Report for CCDS11921.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11921.1 Public Homo sapiens 18 RIT2 24 110 108 CCDS HistoryNCBI Gene:6014Re-query CCDS DB by CCDS ID:11921.1Re-query CCDS DB by GeneID:6014See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11921.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000326695.10 ENSP00000321805.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000326695.10Link to Ensembl Protein Viewer:ENSP00000321805.4Re-query CCDS DB by Nucleotide ID:ENST00000326695Re-query CCDS DB by Protein ID:ENSP00000321805
Original member Current member NCBI NM_002930.4 NP_002921.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002930.4Link to Protein Sequence:NP_002921.1Re-query CCDS DB by Nucleotide ID:NM_002930Re-query CCDS DB by Protein ID:NP_002921Link to BLAST:NP_002921.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002921.1 217 Q99578-1 217 100% 0 0

Chromosomal Locations for CCDS 11921.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 42743493 42743720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 42923572 42923763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 42974074 42974147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 43033811 43033867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 43115417 43115519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (654 nt):
ATGGAGGTAGAAAATGAAGCCAGCTGCTCCCCGGGCAGCGCATCAGGCGGGTCCAGAGAGTACAAGGTGG
TAATGCTGGGAGCAGGGGGAGTTGGTAAAAGCGCAATGACAATGCAGTTTATTAGTCATCAGTTCCCTGA
TTATCATGACCCTACTATAGAAGATGCTTATAAGACCCAGGTCAGGATTGACAATGAGCCAGCTTACTTG
GACATCTTGGACACTGCTGGCCAGGCAGAATTCACAGCCATGCGGGAGCAGTACATGCGAGGTGGGGAAG
GCTTCATCATCTGCTACTCCGTCACTGACCGTCAATCATTTCAGGAGGCTGCCAAGTTTAAAGAGCTCAT
TTTTCAGGTCCGCCACACCTATGAAATTCCCCTGGTGCTGGTGGGTAACAAAATTGATCTGGAACAGTTC
CGCCAGGTTTCTACAGAAGAAGGCTTGAGTCTTGCCCAAGAATATAATTGTGGTTTTTTTGAGACCTCTG
CAGCCCTCAGATTCTGTATTGATGATGCTTTTCATGGCTTAGTGAGGGAAATTCGCAAGAAGGAGTCCAT
GCCATCCTTGATGGAAAAGAAACTGAAGAGAAAAGACAGCCTGTGGAAGAAGCTCAAAGGTTCTTTGAAG
AAGAAGAGAGAAAATATGACATGA

Translation (217 aa):
MEVENEASCSPGSASGGSREYKVVMLGAGGVGKSAMTMQFISHQFPDYHDPTIEDAYKTQVRIDNEPAYL
DILDTAGQAEFTAMREQYMRGGEGFIICYSVTDRQSFQEAAKFKELIFQVRHTYEIPLVLVGNKIDLEQF
RQVSTEEGLSLAQEYNCGFFETSAALRFCIDDAFHGLVREIRKKESMPSLMEKKLKRKDSLWKKLKGSLK
KKRENMT


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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  UCSC Genome Browser
  VEGA Genome Browser

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