NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS11469.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11469.1 Public Homo sapiens 17 DUSP3 24 110 108 CCDS HistoryNCBI Gene:1845Re-query CCDS DB by CCDS ID:11469.1Re-query CCDS DB by GeneID:1845See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11469.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000226004.8 ENSP00000226004.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000226004.8Link to Ensembl Protein Viewer:ENSP00000226004.2Re-query CCDS DB by Nucleotide ID:ENST00000226004Re-query CCDS DB by Protein ID:ENSP00000226004
Original member Current member NCBI NM_004090.4 NP_004081.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004090.4Link to Protein Sequence:NP_004081.1Re-query CCDS DB by Nucleotide ID:NM_004090Re-query CCDS DB by Protein ID:NP_004081Link to BLAST:NP_004081.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004081.1 185 P51452-1 185 100% 0 0

Chromosomal Locations for CCDS 11469.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 43769609 43769814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43774712 43774938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43778800 43778924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (558 nt):
ATGTCGGGCTCGTTCGAGCTCTCGGTGCAGGATCTCAACGACCTGCTCTCGGACGGCAGCGGCTGCTACA
GCCTCCCGAGCCAGCCCTGCAACGAGGTCACCCCGCGGATCTACGTGGGCAACGCGTCTGTGGCTCAGGA
CATCCCCAAGCTGCAGAAACTAGGCATCACCCATGTGCTGAACGCGGCTGAGGGCAGGTCCTTCATGCAC
GTCAACACCAATGCCAACTTCTACAAGGACTCCGGCATCACATACCTGGGCATCAAGGCCAACGACACAC
AGGAGTTCAACCTCAGCGCTTACTTTGAAAGGGCTGCCGACTTCATTGACCAGGCTTTGGCTCAAAAGAA
TGGCCGGGTGCTCGTCCACTGCCGGGAAGGTTATAGCCGCTCCCCAACGCTAGTTATCGCCTACCTCATG
ATGCGGCAGAAGATGGACGTCAAGTCTGCCCTGAGCATCGTGAGGCAGAACCGTGAGATCGGCCCCAACG
ATGGCTTCCTGGCCCAGCTCTGCCAGCTCAATGACAGACTAGCCAAGGAGGGGAAGTTGAAACCCTAG

Translation (185 aa):
MSGSFELSVQDLNDLLSDGSGCYSLPSQPCNEVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMH
VNTNANFYKDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLM
MRQKMDVKSALSIVRQNREIGPNDGFLAQLCQLNDRLAKEGKLKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH