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Report for CCDS13450.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13450.1 Public Homo sapiens 20 FAM210B 24 110 108 CCDS HistoryNCBI Gene:116151Re-query CCDS DB by CCDS ID:13450.1Re-query CCDS DB by GeneID:116151See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13450.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371384.4 ENSP00000360437.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371384.4Link to Ensembl Protein Viewer:ENSP00000360437.3Re-query CCDS DB by Nucleotide ID:ENST00000371384Re-query CCDS DB by Protein ID:ENSP00000360437
Original member Current member NCBI NM_080821.3 NP_543011.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_080821.3Link to Protein Sequence:NP_543011.2Re-query CCDS DB by Nucleotide ID:NM_080821Re-query CCDS DB by Protein ID:NP_543011Link to BLAST:NP_543011.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_543011.2 192 Q96KR6 192 100% 0 0

Chromosomal Locations for CCDS 13450.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 56359006 56359191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 56365087 56365262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 56366071 56366287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (579 nt):
ATGGCCGGGTTGCTGGCGTTGCTGGGTCCGGCAGGCAGGGTGGGCGCCCGGGTCCGGCCTCGCGCCACCT
GGCTCCTGGGCGCCACCGCCCCCTGCGCCCCGCCGCCCCTGGCCCTGGCCCTGCTCCCGCCCAGGCTAGA
CGCCCGGCTGCTCCGCACGGCGCGCGGGGACTGCCGCGGCCACCAGGACCCCAGCCAGGCCACGGGGACA
ACAGGCAGCAGCGTCAGCTGCACAGAGGAGAAAAAGCAAAGCAAGTCACAGCAACTGAAAAAGATTTTTC
AAGAGTATGGCACTGTTGGCGTGTCATTGCACATTGGAATCTCATTAATTTCCTTGGGCATATTTTACAT
GGTTGTGTCAAGTGGTGTGGACATGCCTGCAATCCTGCTGAAACTCGGATTTAAAGAGTCCCTGGTACAG
TCAAAAATGGCAGCAGGCACAAGTACCTTCGTGGTGGCCTATGCAATCCACAAGCTGTTTGCGCCAGTGA
GAATCAGCATTACGCTAGTCTCTGTGCCCTTGATTGTCAGATATTTTCGAAAAGTGGGATTTTTTAAACC
TCCAGCTGCAAAACCTTAA

Translation (192 aa):
MAGLLALLGPAGRVGARVRPRATWLLGATAPCAPPPLALALLPPRLDARLLRTARGDCRGHQDPSQATGT
TGSSVSCTEEKKQSKSQQLKKIFQEYGTVGVSLHIGISLISLGIFYMVVSSGVDMPAILLKLGFKESLVQ
SKMAAGTSTFVVAYAIHKLFAPVRISITLVSVPLIVRYFRKVGFFKPPAAKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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