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Report for CCDS31422.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31422.1 Public Homo sapiens 11 NRIP3 24 110 108 CCDS HistoryNCBI Gene:56675Re-query CCDS DB by CCDS ID:31422.1Re-query CCDS DB by GeneID:56675See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31422.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309166.8 ENSP00000310205.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000309166.8Link to Ensembl Protein Viewer:ENSP00000310205.3Re-query CCDS DB by Nucleotide ID:ENST00000309166Re-query CCDS DB by Protein ID:ENSP00000310205
Original member Current member NCBI NM_020645.3 NP_065696.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020645.3Link to Protein Sequence:NP_065696.1Re-query CCDS DB by Nucleotide ID:NM_020645Re-query CCDS DB by Protein ID:NP_065696Link to BLAST:NP_065696.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065696.1 241 Q9NQ35 241 100% 0 0

Chromosomal Locations for CCDS 31422.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 8983545 8983560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8983875 8983969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8984072 8984124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8985711 8985850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8987548 8987630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8988118 8988282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9003762 9003935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (726 nt):
ATGTTTTACTCAGGGCTCCTCACTGAGGGCGGCCGCAAGGAGACCGACATGCGGGAGGCGGCGTCACTGC
GACAGCAGCGCCGGATGAAGCAGGCGGTGCAGTTCATCCACAAGGACTCCGCCGACCTGCTGCCCCTGGA
CGGCCTCAAGAAGCTGGGCTCGTCCAAGGACATGCAACCTCATAATATTCTGCAGAGGCGCCTCATGGAA
ACCAACCTGTCTAAGCTCCGAAGCGGTCCCCGTGTCCCTTGGGCCTCTAAGACGAACAAACTCAATCAGG
CTAAGTCTGAGGGGCTAAAGAAGTCTGAGGAGGATGACATGATTTTGGTTTCTTGCCAGTGTGCTGGAAA
GGATGTGAAAGCCTTGGTTGACACAGGCTGCCTATATAATCTCATCTCTTTGGCCTGTGTGGACAGATTG
GGACTCAAGGAGCATGTCAAATCCCACAAGCATGAAGGAGAAAAGCTTTCTCTACCCCGGCATCTCAAAG
TAGTGGGCCAGATTGAGCACCTAGTGATCACACTGGGCTCCCTCCGCCTGGACTGCCCAGCAGCTGTGGT
TGATGACAATGAGAAAAACTTGTCCCTTGGTCTACAGACTCTCCGATCTCTGAAGTGCATCATAAACTTG
GATAAGCACCGGCTGATCATGGGGAAGACAGACAAGGAAGAAATCCCTTTTGTGGAGACAGTCTCTTTGA
ATGAAGACAACACTTCAGAAGCATAA

Translation (241 aa):
MFYSGLLTEGGRKETDMREAASLRQQRRMKQAVQFIHKDSADLLPLDGLKKLGSSKDMQPHNILQRRLME
TNLSKLRSGPRVPWASKTNKLNQAKSEGLKKSEEDDMILVSCQCAGKDVKALVDTGCLYNLISLACVDRL
GLKEHVKSHKHEGEKLSLPRHLKVVGQIEHLVITLGSLRLDCPAAVVDDNEKNLSLGLQTLRSLKCIINL
DKHRLIMGKTDKEEIPFVETVSLNEDNTSEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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