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Report for CCDS3733.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3733.1 Public Homo sapiens 4 SLC25A31 24 110 108 CCDS HistoryNCBI Gene:83447Re-query CCDS DB by CCDS ID:3733.1Re-query CCDS DB by GeneID:83447See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3733.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000281154.6 ENSP00000281154.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000281154.6Link to Ensembl Protein Viewer:ENSP00000281154.4Re-query CCDS DB by Nucleotide ID:ENST00000281154Re-query CCDS DB by Protein ID:ENSP00000281154
Original member Current member NCBI NM_031291.4 NP_112581.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031291.4Link to Protein Sequence:NP_112581.1Re-query CCDS DB by Nucleotide ID:NM_031291Re-query CCDS DB by Protein ID:NP_112581Link to BLAST:NP_112581.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_112581.1 315 Q9H0C2 315 100% 0 0

Chromosomal Locations for CCDS 3733.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 127730546 127730777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 127744672 127744799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 127764243 127764360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 127767066 127767220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 127768752 127768877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 127773386 127773574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGCATCGTGAGCCTGCGAAAAAGAAGGCAGAAAAGCGGCTGTTTGACGCCTCATCCTTCGGGAAGGACC
TTCTGGCCGGCGGAGTCGCGGCAGCTGTGTCCAAGACAGCGGTGGCGCCCATCGAGCGGGTGAAGCTGCT
GCTGCAGGTGCAGGCGTCGTCGAAGCAGATCAGCCCCGAGGCGCGGTACAAAGGCATGGTGGACTGCCTG
GTGCGGATTCCTCGCGAGCAGGGTTTCTTCAGTTTTTGGCGTGGCAATTTGGCAAATGTTATTCGGTATT
TTCCAACACAAGCTCTAAACTTTGCTTTTAAGGACAAATACAAGCAGCTATTCATGTCTGGAGTTAATAA
AGAAAAACAGTTCTGGAGGTGGTTTTTGGCAAACCTGGCTTCTGGTGGAGCTGCTGGGGCAACATCCTTA
TGTGTAGTATATCCTCTAGATTTTGCCCGAACCCGATTAGGTGTCGATATTGGAAAAGGTCCTGAGGAGC
GACAATTCAAGGGTTTAGGTGACTGTATTATGAAAATAGCAAAATCAGATGGAATTGCTGGTTTATACCA
AGGGTTTGGTGTTTCAGTACAGGGCATCATTGTGTACCGAGCCTCTTATTTTGGAGCTTATGACACAGTT
AAGGGTTTATTACCAAAGCCAAAGAAAACTCCATTTCTTGTCTCCTTTTTCATTGCTCAAGTTGTGACTA
CATGCTCTGGAATACTTTCTTATCCCTTTGACACAGTTAGAAGACGTATGATGATGCAGAGTGGTGAGGC
TAAACGGCAATATAAAGGAACCTTAGACTGCTTTGTGAAGATATACCAACATGAAGGAATCAGTTCCTTT
TTTCGTGGCGCCTTCTCCAATGTTCTTCGCGGTACAGGGGGTGCTTTGGTGTTGGTATTATATGATAAAA
TTAAAGAATTCTTTCATATTGATATTGGTGGTAGGTAA

Translation (315 aa):
MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPEARYKGMVDCL
VRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLASGGAAGATSL
CVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSDGIAGLYQGFGVSVQGIIVYRASYFGAYDTV
KGLLPKPKKTPFLVSFFIAQVVTTCSGILSYPFDTVRRRMMMQSGEAKRQYKGTLDCFVKIYQHEGISSF
FRGAFSNVLRGTGGALVLVLYDKIKEFFHIDIGGR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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