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Report for CCDS12014.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12014.1 Public Homo sapiens 18 ATP9B 24 110 108 CCDS HistoryNCBI Gene:374868Re-query CCDS DB by CCDS ID:12014.1Re-query CCDS DB by GeneID:374868See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12014.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000426216.6 ENSP00000398076.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000426216.6Link to Ensembl Protein Viewer:ENSP00000398076.2Re-query CCDS DB by Nucleotide ID:ENST00000426216Re-query CCDS DB by Protein ID:ENSP00000398076
Original member Current member NCBI NM_198531.5 NP_940933.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198531.5Link to Protein Sequence:NP_940933.3Re-query CCDS DB by Nucleotide ID:NM_198531Re-query CCDS DB by Protein ID:NP_940933Link to BLAST:NP_940933.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_940933.3 1147 O43861-1 1147 100% 0 0

Chromosomal Locations for CCDS 12014.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 79069411 79069529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79096476 79096649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79110355 79110505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79113241 79113354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79126267 79126375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79143802 79143860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79154504 79154555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79176813 79176907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79193183 79193263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79206937 79207012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79213962 79214038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79253381 79253541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79277054 79277196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79303604 79303716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79306986 79307234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79329141 79329302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79330012 79330104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79336628 79336711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79337279 79337449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79342268 79342366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79344265 79344354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79345428 79345572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79345775 79345839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79347770 79347925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79348132 79348196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79359354 79359462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79372825 79372882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79373898 79374101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79375394 79375426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 79377247 79377383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3444 nt):
ATGGCGGACCAGATCCCGCTTTACCCGGTGCGTAGCGCAGCGGCGGCCGCAGCCAACCGCAAACGCGCGG
CCTACTACAGCGCCGCGGGGCCCAGGCCGGGAGCCGACCGGCACAGCAGGTACCAGCTGGAGGATGAGTC
TGCGCATTTGGATGAAATGCCACTAATGATGTCTGAAGAAGGCTTTGAGAATGAGGAAAGTGATTACCAC
ACCTTACCACGAGCCAGGATAATGCAAAGGAAAAGAGGACTGGAGTGGTTTGTCTGTGATGGCTGGAAGT
TCCTCTGTACCAGTTGCTGTGGTTGGCTGATAAATATTTGTCGAAGAAAGAAAGAGCTGAAAGCTCGCAC
AGTATGGCTTGGATGTCCTGAAAAGTGTGAAGAAAAACATCCCAGGAATTCTATAAAAAATCAAAAATAC
AATGTGTTTACCTTTATACCTGGGGTTTTGTATGAACAATTCAAGTTTTTCTTGAATCTCTATTTTCTAG
TAATATCCTGCTCACAGTTTGTACCAGCATTGAAAATAGGCTATCTCTACACCTACTGGGCTCCTCTGGG
ATTTGTCTTGGCTGTTACTATGACACGGGAAGCAATTGATGAATTTCGGCGTTTTCAGCGTGACAAGGAA
GTGAATTCACAACTATATAGCAAGCTTACAGTAAGAGGTAAAGTGCAAGTTAAGAGTTCAGACATACAAG
TTGGAGACCTCATCATAGTGGAAAAGAATCAAAGAATTCCATCGGACATGGTGTTTCTTAGGACTTCAGA
AAAAGCAGGTTCGTGTTTTATTCGAACTGATCAACTAGATGGTGAAACTGACTGGAAGCTGAAGGTGGCA
GTGAGCTGCACGCAACAGCTGCCGGCTCTGGGGGACCTTTTTTCTATCAGTGCTTATGTTTATGCTCAGA
AACCACAAATGGACATTCACAGTTTCGAAGGCACATTTACCAGGGAAGACAGTGACCCGCCCATTCATGA
AAGTCTCAGCATAGAAAATACATTGTGGGCAAGCACCATTGTTGCATCAGGTACTGTAATAGGTGTTGTC
ATTTATACCGGAAAAGAGACTCGAAGTGTAATGAACACATCCAATCCAAAAAATAAGGTTGGTTTGTTGG
ACCTTGAACTCAATCGGCTGACGAAAGCGCTATTTTTGGCTTTAGTTGCTCTTTCCATTGTTATGGTAAC
CTTACAAGGATTTGTGGGTCCATGGTACCGCAATCTTTTTCGGTTCCTTCTCCTCTTTTCTTACATCATT
CCCATAAGTTTGCGTGTGAACTTGGACATGGGCAAAGCGGTGTATGGATGGATGATGATGAAAGATGAGA
ACATCCCTGGCACGGTCGTTCGGACCAGCACTATCCCAGAGGAACTTGGGCGCCTGGTGTATTTATTGAC
AGACAAAACAGGAACCCTCACCCAGAATGAAATGATATTTAAGCGGCTGCACCTGGGCACCGTGTCCTAT
GGCGCCGACACGATGGATGAGATCCAGAGCCATGTCAGGGACTCCTACTCACAGATGCAGTCTCAAGCTG
GTGGAAACAATACTGGTTCAACTCCACTAAGAAAAGCCCAATCTTCAGCTCCCAAAGTTAGGAAAAGTGT
CAGTAGTCGAATCCATGAAGCCGTGAAAGCCATCGTGCTGTGTCACAACGTGACCCCCGTGTATGAGTCT
CGGGCCGGCGTTACTGAGGAGACTGAGTTCGCAGAGGCTGACCAAGACTTCAGTGATGAGAATCGCACCT
ACCAGGCTTCCAGCCCGGATGAGGTCGCTCTGGTGCAGTGGACAGAGAGTGTGGGCCTCACGCTGGTCAG
CAGGGACCTCACCTCCATGCAGCTGAAGACCCCCAGTGGCCAGGTCCTCAGCTTCTGCATTCTGCAGCTG
TTTCCCTTCACCTCCGAGAGCAAGCGGATGGGCGTCATCGTCAGGGATGAATCCACGGCAGAAATCACAT
TCTACATGAAGGGCGCTGACGTGGCCATGTCTCCTATCGTGCAGTATAATGACTGGCTGGAAGAGGAGTG
CGGAAACATGGCTCGCGAAGGACTGCGGACCCTCGTGGTTGCAAAGAAGGCGTTGACAGAGGAGCAGTAC
CAGGACTTTGAGAGCCGATACACTCAAGCCAAGCTGAGCATGCACGACAGGTCCCTCAAGGTGGCCGCGG
TAGTCGAGAGCCTGGAGAGGGAGATGGAACTGCTGTGCCTCACCGGCGTGGAGGACCAGCTGCAGGCAGA
CGTGCGGCCCACGCTGGAGATGCTGCGCAACGCCGGGATCAAGATATGGATGCTAACAGGCGATAAACTC
GAGACAGCTACCTGCATTGCCAAAAGTTCACATCTCGTGTCTAGAACACAAGATATTCATATTTTCAGAC
AGGTAACCAGTCGGGGAGAGGCACATTTGGAGCTGAATGCATTTCGAAGGAAGCATGATTGTGCACTAGT
CATATCTGGGGACTCTCTGGAGGTTTGTCTAAAGTACTACGAGCATGAATTTGTGGAGCTGGCCTGCCAG
TGCCCTGCCGTGGTTTGCTGCCGCTGCTCACCCACCCAGAAGGCCCGCATTGTGACACTGCTGCAGCAGC
ACACAGGGAGACGCACCTGCGCCATCGGTGATGGAGGAAATGATGTCAGCATGATTCAGGCAGCAGACTG
TGGGATTGGGATTGAGGGAAAGGAGGGTAAACAGGCCTCGCTGGCGGCCGACTTCTCCATCACGCAGTTC
CGGCACATAGGCAGGCTGCTCATGGTGCACGGGCGGAACAGCTACAAGAGGTCGGCGGCACTCGGCCAGT
TCGTCATGCACAGGGGCCTTATCATCTCCACCATGCAGGCTGTGTTTTCCTCAGTCTTCTACTTCGCATC
CGTCCCTTTGTATCAGGGCTTCCTCATGGTGGGGTATGCCACCATATACACCATGTTCCCAGTGTTCTCC
TTAGTGCTGGACCAGGACGTGAAGCCAGAGATGGCGATGCTCTACCCGGAGCTGTACAAGGACCTCACCA
AGGGAAGATCCTTGTCCTTCAAAACCTTCCTCATCTGGGTTTTAATAAGTATTTACCAAGGCGGCATCCT
CATGTATGGGGCCCTGGTGCTCTTCGAGTCTGAGTTCGTCCACGTGGTGGCCATCTCCTTCACCGCACTG
ATCCTGACCGAGCTGCTGATGGTGGCGCTGACCGTCCGCACGTGGCACTGGCTGATGGTGGTGGCCGAGT
TCCTCAGCTTAGGCTGCTACGTGTCCTCACTCGCTTTTCTCAATGAATATTTTGGTATAGGCAGAGTGTC
TTTTGGAGCTTTCTTAGATGTTGCCTTTATCACCACCGTGACCTTCCTGTGGAAAGTGTCGGCGATCACC
GTGGTCAGCTGCCTCCCGCTGTATGTCCTCAAGTACCTGAGGCGCAAGCTCTCTCCTCCCAGCTACTGCA
AGCTGGCCTCCTAA

Translation (1147 aa):
MADQIPLYPVRSAAAAAANRKRAAYYSAAGPRPGADRHSRYQLEDESAHLDEMPLMMSEEGFENEESDYH
TLPRARIMQRKRGLEWFVCDGWKFLCTSCCGWLINICRRKKELKARTVWLGCPEKCEEKHPRNSIKNQKY
NVFTFIPGVLYEQFKFFLNLYFLVISCSQFVPALKIGYLYTYWAPLGFVLAVTMTREAIDEFRRFQRDKE
VNSQLYSKLTVRGKVQVKSSDIQVGDLIIVEKNQRIPSDMVFLRTSEKAGSCFIRTDQLDGETDWKLKVA
VSCTQQLPALGDLFSISAYVYAQKPQMDIHSFEGTFTREDSDPPIHESLSIENTLWASTIVASGTVIGVV
IYTGKETRSVMNTSNPKNKVGLLDLELNRLTKALFLALVALSIVMVTLQGFVGPWYRNLFRFLLLFSYII
PISLRVNLDMGKAVYGWMMMKDENIPGTVVRTSTIPEELGRLVYLLTDKTGTLTQNEMIFKRLHLGTVSY
GADTMDEIQSHVRDSYSQMQSQAGGNNTGSTPLRKAQSSAPKVRKSVSSRIHEAVKAIVLCHNVTPVYES
RAGVTEETEFAEADQDFSDENRTYQASSPDEVALVQWTESVGLTLVSRDLTSMQLKTPSGQVLSFCILQL
FPFTSESKRMGVIVRDESTAEITFYMKGADVAMSPIVQYNDWLEEECGNMAREGLRTLVVAKKALTEEQY
QDFESRYTQAKLSMHDRSLKVAAVVESLEREMELLCLTGVEDQLQADVRPTLEMLRNAGIKIWMLTGDKL
ETATCIAKSSHLVSRTQDIHIFRQVTSRGEAHLELNAFRRKHDCALVISGDSLEVCLKYYEHEFVELACQ
CPAVVCCRCSPTQKARIVTLLQQHTGRRTCAIGDGGNDVSMIQAADCGIGIEGKEGKQASLAADFSITQF
RHIGRLLMVHGRNSYKRSAALGQFVMHRGLIISTMQAVFSSVFYFASVPLYQGFLMVGYATIYTMFPVFS
LVLDQDVKPEMAMLYPELYKDLTKGRSLSFKTFLIWVLISIYQGGILMYGALVLFESEFVHVVAISFTAL
ILTELLMVALTVRTWHWLMVVAEFLSLGCYVSSLAFLNEYFGIGRVSFGAFLDVAFITTVTFLWKVSAIT
VVSCLPLYVLKYLRRKLSPPSYCKLAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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