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Report for CCDS31893.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31893.1 Public Homo sapiens 12 ABTB3 24 110 108 CCDS HistoryNCBI Gene:121551Re-query CCDS DB by CCDS ID:31893.1Re-query CCDS DB by GeneID:121551See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31893.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000280758.10 ENSP00000280758.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000280758.10Link to Ensembl Protein Viewer:ENSP00000280758.5Re-query CCDS DB by Nucleotide ID:ENST00000280758Re-query CCDS DB by Protein ID:ENSP00000280758
Original member Current member NCBI NM_001018072.2 NP_001018082.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001018072.2Link to Protein Sequence:NP_001018082.1Re-query CCDS DB by Nucleotide ID:NM_001018072Re-query CCDS DB by Protein ID:NP_001018082Link to BLAST:NP_001018082.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001018082.1 1104 A6QL63-1 1104 100% 0 0

Chromosomal Locations for CCDS 31893.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 107318941 107320075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107520487 107520636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107543935 107544139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107581152 107581304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107610190 107610355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107612780 107612869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107615061 107615162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107617089 107617182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107617301 107617436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107618158 107618378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107619986 107620164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107635285 107635390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107640311 107640413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107642090 107642171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107649206 107649274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107651674 107651787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107657509 107657718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3315 nt):
ATGGCCAGGAGAGGTAAGAAGCCCGTGGTGAGAACGCTGGAGGATCTGACGCTGGACTCGGGTTATGGTG
GCGCGGCGGACTCGGTGCGCTCCTCCAACTTGTCTTTGTGCTGTTCCGACTCGCACCCGGCGTCCCCGTA
TGGCGGGAGCTGCTGGCCGCCTCTAGCTGACTCCATGCACAGCCGGCACAACAGCTTTGACACTGTCAAC
ACTGCCCTGGTGGAAGACTCCGAGGGGCTGGACTGCGCCGGCCAGCACTGCTCGCGGCTGCTGCCGGACC
TAGACGAGGTCCCCTGGACTCTCCAGGAGCTGGAGGCGCTGCTGCTGCGTTCGCGGGATCCCCGGGCAGG
CCCGGCGGTCCCCGGCGGCCTGCCCAAGGACGCGCTGGCCAAGCTGTCGACGCTGGTGAGCCGGGCGCTG
GTGCGCATAGCCAAAGAGGCGCAGCGCCTGAGCCTGCGCTTCGCCAAGTGCACCAAGTACGAGATCCAGA
GCGCCATGGAGATCGTGCTGTCCTGGGGCCTGGCCGCGCACTGTACGGCGGCTGCGCTGGCCGCACTGTC
CCTCTACAACATGAGCAGCGCCGGCGGCGACCGCCTGGGCCGCGGCAAGTCGGCCCGCTGCGGCCTCACC
TTCTCCGTGGGCCGCGTGTATCGCTGGATGGTGGACAGCCGCGTGGCGCTGCGCATCCACGAGCACGCCG
CCATCTACCTGACAGCCTGCATGGAGAGCCTCTTCCGGGACATCTACTCGCGGGTCGTGGCCTCCGGGGT
GCCCCGGAGCTGCAGTGGCCCTGGGTCAGGCTCGGGCTCCGGCCCAGGCCCGAGCTCGGGCCCTGGTGCG
GCCCCCGCGGCGGATAAAGAGCGGGAGGCGCCCGGGGGAGGAGCGGCGAGCGGCGGCGCCTGCAGCGCAG
CCAGCAGCGCCAGCGGGGGCAGCAGCTGTTGCGCCCCGCCGGCCGCCGCGGCCGCCGCAGTCCCGCCGGC
AGCCGCCGCCAACCACCACCATCACCACCACCATGCGCTCCACGAGGCGCCCAAGTTCACCGTGGAGACC
CTGGAGCACACGGTCAACAACGACTCGGAGATCTGGGGTCTCCTGCAGCCCTACCAGCACCTGATCTGCG
GGAAGAACGCCAGCGGGGTGCTGTGCCTACCAGACAGCCTGAATCTTCACAGAGACCCACAGCGGTCAAA
CAAGCCAGGGGAACTGCCCATGTTCAGCCAGTCGGAGCTGAGGACCATCGAGCAGTCTTTGCTGGCCACG
CGCGTAGGCAGCATCGCCGAATTGAGTGACCTGGTGTCCCGTGCAATGCATCACCTGCAGCCCCTCAATG
CCAAGCACCACGGCAATGGCACCCCCCTGCACCACAAGCAGGGGGCACTGTACTGGGAGCCCGAGGCCCT
GTACACCCTTTGCTATTTCATGCACTGCCCACAAATGGAATGGGAAAACCCCAACGTGGAGCCTTCCAAA
GTCAACCTCCAGGTGGAAAGGCCCTTCCTCGTGCTGCCGCCGCTGATGGAGTGGATCCGGGTGGCCGTGG
CGCACGCCGGCCACCGCCGCAGCTTCTCCATGGACAGCGACGACGTCCGCCAGGCGGCCCGGCTGCTGCT
GCCCGGCGTGGACTGCGAGCCGCGCCAGCTCAGGGCCGACGACTGCTTTTGTGCATCTCGAAAGCTGGAT
GCGGTGGCCATCGAAGCCAAGTTTAAGCAGGACCTGGGTTTCCGGATGCTGAACTGTGGACGAACAGACC
TGGTGAAGCAGGCAGTGTCTCTGCTGGGGCCCGATGGGATCAACACCATGAGCGAACAGGGCATGACTCC
CCTGATGTATGCCTGCGTCCGTGGGGACGAGGCGATGGTTCAGATGCTGCTGGATGCCGGAGCTGACCTG
AATGTGGAGGTTGTCAGTACTCCTCATAAATATCCATCCGTCCACCCCGAGACCCGCCATTGGACGGCTC
TGACTTTTGCTGTGTTGCATGGACATATTCCTGTAGTTCAGCTCCTCCTGGATGCTGGGGCCAAGGTGGA
AGGCTCAGTGGAGCATGGCGAGGAGAACTACTCGGAAACACCCCTCCAGCTGGCAGCTGCTGTAGGAAAT
TTTGAGCTGGTTAGTTTGCTGTTGGAGCGTGGTGCCGATCCCCTGATAGGAACCATGTACAGGAATGGAA
TTTCTACAACCCCCCAGGGTGATATGAACTCTTTCAGCCAGGCTGCAGCCCACGGACACAGGAATGTGTT
CCGCAAACTGCTCGCCCAGCCAGAGAAGGAGAAGAGTGATATCCTGTCCCTGGAGGAGATTCTGGCCGAG
GGGACTGACCTGGCGGAGACAGCCCCGCCCCCCTTGTGCGCCAGCCGCAACAGCAAGGCCAAACTGAGGG
CCCTGAGGGAGGCCATGTATCACAGCGCTGAGCATGGCTACGTGGATGTCACAATTGATATCAGGAGCAT
AGGCGTCCCGTGGACTCTGCACACGTGGCTGGAGTCTTTGCGGATCGCCTTCCAGCAGCACCGCAGGCCT
CTCATCCAGTGCTTGTTAAAGGAGTTTAAGACCATTCAGGAGGAGGAATACACGGAGGAGCTCGTTACCC
AAGGCCTGCCCCTGATGTTTGAGATCCTGAAAGCGAGCAAGAATGAAGTGATCAGCCAGCAGCTGTGCGT
CATCTTCACACACTGCTACGGGCCCTACCCCATCCCCAAGCTCACAGAAATCAAACGGAAACAGACCTCG
CGCTTGGATCCTCATTTTCTTAACAATAAAGAAATGTCTGATGTTACATTTCTGGTAGAAGGAAGACCAT
TTTATGCTCACAAAGTGCTGTTATTTACAGCCTCTCCAAGGTTCAAAGCACTCCTCTCCAGCAAGCCGAC
AAATGATGGCACCTGCATAGAGATTGGTTATGTGAAATACTCCATCTTTCAGCTGGTTATGCAGTATCTC
TACTATGGTGGCCCAGAGTCACTGCTCATTAAAAACAATGAGATCATGGAGCTTCTGTCTGCTGCTAAGT
TTTTCCAGCTGGAGGCTTTGCAGCGACACTGTGAGATTATCTGTGCGAAAAGCATCAATACCGACAACTG
TGTGGATATTTACAACCATGCCAAGTTTCTTGGAGTCACAGAGCTCTCAGCATATTGCGAAGGCTACTTT
CTCAAAAACATGATGGTCCTCATTGAAAACGAAGCATTCAAGCAGCTCCTGTATGACAAAAATGGTGAAG
GGACCGGCCAGGATGTGCTCCAGGACTTACAGAGGACGTTGGCCATCAGAATTCAGTCCATCCACTTGTC
GTCTTCCAAAGGTTCCGTGGTATGA

Translation (1104 aa):
MARRGKKPVVRTLEDLTLDSGYGGAADSVRSSNLSLCCSDSHPASPYGGSCWPPLADSMHSRHNSFDTVN
TALVEDSEGLDCAGQHCSRLLPDLDEVPWTLQELEALLLRSRDPRAGPAVPGGLPKDALAKLSTLVSRAL
VRIAKEAQRLSLRFAKCTKYEIQSAMEIVLSWGLAAHCTAAALAALSLYNMSSAGGDRLGRGKSARCGLT
FSVGRVYRWMVDSRVALRIHEHAAIYLTACMESLFRDIYSRVVASGVPRSCSGPGSGSGSGPGPSSGPGA
APAADKEREAPGGGAASGGACSAASSASGGSSCCAPPAAAAAAVPPAAAANHHHHHHHALHEAPKFTVET
LEHTVNNDSEIWGLLQPYQHLICGKNASGVLCLPDSLNLHRDPQRSNKPGELPMFSQSELRTIEQSLLAT
RVGSIAELSDLVSRAMHHLQPLNAKHHGNGTPLHHKQGALYWEPEALYTLCYFMHCPQMEWENPNVEPSK
VNLQVERPFLVLPPLMEWIRVAVAHAGHRRSFSMDSDDVRQAARLLLPGVDCEPRQLRADDCFCASRKLD
AVAIEAKFKQDLGFRMLNCGRTDLVKQAVSLLGPDGINTMSEQGMTPLMYACVRGDEAMVQMLLDAGADL
NVEVVSTPHKYPSVHPETRHWTALTFAVLHGHIPVVQLLLDAGAKVEGSVEHGEENYSETPLQLAAAVGN
FELVSLLLERGADPLIGTMYRNGISTTPQGDMNSFSQAAAHGHRNVFRKLLAQPEKEKSDILSLEEILAE
GTDLAETAPPPLCASRNSKAKLRALREAMYHSAEHGYVDVTIDIRSIGVPWTLHTWLESLRIAFQQHRRP
LIQCLLKEFKTIQEEEYTEELVTQGLPLMFEILKASKNEVISQQLCVIFTHCYGPYPIPKLTEIKRKQTS
RLDPHFLNNKEMSDVTFLVEGRPFYAHKVLLFTASPRFKALLSSKPTNDGTCIEIGYVKYSIFQLVMQYL
YYGGPESLLIKNNEIMELLSAAKFFQLEALQRHCEIICAKSINTDNCVDIYNHAKFLGVTELSAYCEGYF
LKNMMVLIENEAFKQLLYDKNGEGTGQDVLQDLQRTLAIRIQSIHLSSSKGSVV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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