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Report for CCDS7553.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7553.1 Public Homo sapiens 10 SLK 24 110 108 CCDS HistoryNCBI Gene:9748Re-query CCDS DB by CCDS ID:7553.1Re-query CCDS DB by GeneID:9748See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7553.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369755.4 ENSP00000358770.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369755.4Link to Ensembl Protein Viewer:ENSP00000358770.3Re-query CCDS DB by Nucleotide ID:ENST00000369755Re-query CCDS DB by Protein ID:ENSP00000358770
Original member Current member NCBI NM_014720.4 NP_055535.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014720.4Link to Protein Sequence:NP_055535.2Re-query CCDS DB by Nucleotide ID:NM_014720Re-query CCDS DB by Protein ID:NP_055535Link to BLAST:NP_055535.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055535.2 1235 Q9H2G2-1 1235 100% 0 0

Chromosomal Locations for CCDS 7553.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 103967746 103967895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 103990675 103990839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 103992598 103992646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 103992984 103993133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 103998899 103998971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 103999119 103999313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 103999867 103999948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104001444 104001572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104002172 104003527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104005561 104005691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104005912 104006035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104008177 104008356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104010816 104010908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104018160 104018289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104018784 104018908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104019734 104019922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104020488 104020613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104021620 104021733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104025574 104025720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3708 nt):
ATGTCCTTCTTCAATTTCCGTAAGATCTTCAAGTTGGGGAGCGAGAAGAAGAAGAAGCAGTACGAACACG
TG
AAGAGGGACCTGAACCCCGAAGACTTTTGGGAGATTATAGGAGAACTGGGCGACGGAGCCTTTGGGAA
A
GTGTACAAGGCCCAGAATAAAGAGACCAGTGTTTTAGCTGCTGCAAAAGTGATTGACACTAAATCTGAA
GAA
GAACTTGAAGATTACATGGTAGAGATTGACATATTAGCATCTTGTGATCACCCAAATATAGTCAAGC
TT
CTAGATGCCTTCTATTATGAGAACAATCTTTGGATCCTCATTGAATTTTGTGCAGGTGGAGCAGTAGA
T
GCTGTGATGCTTGAACTTGAGAGACCATTAACTGAGTCCCAAATACAAGTAGTTTGCAAGCAGACTTTA
GAT
GCATTGAACTACTTACATGATAATAAGATCATCCACAGAGATCTGAAGGCTGGCAACATTCTCTTTA
CC
TTAGATGGAGATATCAAATTGGCGGATTTTGGAGTATCAGCTAAAAACACGAGGACAATTCAAAGAAG
A
GATTCCTTTATTGGTACACCATATTGGATGGCTCCTGAAGTAGTCATGTGTGAAACATCTAAGGACAGA
CCC
TATGACTACAAAGCTGATGTTTGGTCCCTGGGTATCACTTTAATAGAAATGGCTGAGATAGAACCAC
CT
CATCATGAATTAAATCCAATGCGAGTGCTGCTAAAAATAGCAAAATCTGAGCCACCTACATTAGCACA
G
CCATCCAGATGGTCTTCAAATTTTAAGGACTTTCTAAAGAAATGCTTAGAAAAGAATGTGGATGCCAGG
TGG
ACTACATCTCAGCTGCTGCAGCATCCCTTTGTTACTGTTGATTCCAACAAACCCATCCGAGAATTGA
TT
GCAGAGGCGAAGGCTGAAGTAACAGAAGAAGTTGAAGATGGCAAAGAGGAAGATGAAGAGGAGGAAAC
A
GAAAATTCTCTGCCAATACCTGCAAGTAAGCGTGCATCTTCTGACCTTAGTATCGCCAGCTCTGAAGAA
GAT
AAACTTTCACAAAATGCTTGTATTTTGGAGTCTGTCTCAGAAAAAACAGAACGTAGTAACTCTGAAG
AT
AAACTCAACAGCAAAATTCTTAATGAAAAACCCACCACTGATGAACCTGAAAAGGCTGTGGAGGATAT
T
AATGAACATATTACCGATGCTCAGTTAGAAGCAATGACTGAACTCCATGACAGAACAGCAGTAATCAAG
GAG
AATGAAAGAGAGAAGAGGCCCAAGCTTGAAAATCTGCCTGACACAGAAGACCAAGAAACTGTGGACA
TT
AATTCAGTCAGTGAAGGAAAAGAGAATAATATAATGATAACCTTAGAAACAAATATTGAACATAATCT
A
AAATCTGAGGAAGAAAAGGATCAGGAAAAGCAACAGATGTTTGAAAATAAGCTTATAAAATCTGAAGAA
ATT
AAAGATACTATTTTGCAAACAGTAGATTTAGTTTCTCAAGAGACTGGAGAAAAAGAGGCAAATATTC
AG
GCAGTTGATAGTGAAGTTGGGCTTACAAAGGAAGACACCCAAGAGAAATTGGGGGAAGACGACAAAAC
T
CAAAAAGATGTGATCAGCAATACAAGTGATGTGATAGGAACATGTGAGGCAGCAGATGTGGCTCAGAAA
GTG
GATGAAGACAGTGCTGAGGATACGCAGAGTAATGATGGGAAAGAAGTGGTCGAAGTAGGCCAGAAAT
TA
ATTAATAAGCCCATGGTGGGTCCTGAGGCTGGTGGTACTAAGGAAGTTCCTATTAAAGAAATAGTTGA
A
ATGAATGAAATAGAAGAAGGTAAAAATAAGGAACAAGCAATAAACAGTTCAGAGAACATAATGGACATC
AAT
GAGGAACCAGGAACAACTGAAGGTGAAGAAATCACTGAGTCAAGTAGCACTGAAGAAATGGAGGTCA
GA
AGTGTGGTGGCTGATACTGACCAAAAGGCTTTAGGAAGTGAAGTTCAGGATGCTTCTAAAGTCACTAC
T
CAGATAGATAAAGAGAAAAAAGAAATTCCAGTGTCAATTAAAAAAGAGCCTGAAGTTACTGTAGTTTCA
CAG
CCCACTGAACCTCAGCCTGTTCTAATACCCAGTATTAATATCAACTCTGACAGTGGAGAAAATAAAG
AA
GAAATAGGTTCTTTATCAAAAACTGAAACTATTCTGCCACCAGAATCTGAGAATCCAAAGGAAAATGA
T
AATGATTCAGGCACTGGTTCCACTGCTGATACTAGCAGTATTGACTTGAATTTATCCATCTCTAGCTTT
CTA
AGTAAAACTAAAGACAGTGGATCGATATCTTTACAAGAAACAAGAAGACAAAAGAAAACATTGAAGA
AA
ACACGCAAATTTATTGTTGATGGTGTAGAAGTGAGTGTAACAACATCAAAGATAGTTACAGATAGTGA
T
TCCAAAACTGAAGAATTGCGGTTTCTTAGACGTCAGGAACTTCGGGAATTAAGATTTCTTCAGAAAGAA
GAG
CAAAGAGCCCAACAACAGCTCAATAGCAAACTACAGCAACAACGAGAACAAATTTTCCGGCGCTTTG
AG
CAGGAAATGATGAGTAAAAAGCGACAATATGACCAGGAAATTGAGAATCTAGAAAAACAGCAGAAACA
G
ACTATCGAACGCCTGGAACAAGAGCACACAAATCGCTTGCGAGATGAAGCCAAACGCATCAAAGGAGAA
CAA
GAGAAAGAGTTGTCCAAATTTCAGAATATGCTGAAGAACCGAAAGAAGGAGGTTATAAATGAAGTGG
AG
AAAGCACCCAAAGAGCTGAGAAAAGAGCTCATGAAACGCAGGAAAGAGGAGCTTGCACAAAGCCAGCA
T
GCTCAGGAACAAGAGTTTGTTCAGAAACAACAGCAAGAATTAGATGGCTCTCTGAAAAAGATCATCCAG
CAG
CAGAAGGCAGAGTTAGCTAATATTGAGAGAGAGTGCCTGAATAACAAGCAACAGCTCATGAGAGCTC
GA
GAAGCTGCAATTTGGGAGCTCGAAGAACGACACTTACAAGAAAAACACCAGCTGCTCAAACAGCAGCT
T
AAAGATCAGTATTTCATGCAAAGACATCAGCTACTTAAGCGCCACGAGAAGGAAACAGAGCAAATGCAG
CGT
TACAATCAAAGACTTATTGAGGAATTGAAAAACAGACAGACTCAAGAAAGAGCAAGACTGCCCAAGA
TT
CAGCGCAGTGAAGCCAAGACTCGAATGGCCATGTTTAAGAAGAGTTTGAGAATTAACTCAACAGCCAC
A
CCAGATCAGGACCGTGATAAAATTAAACAGTTTGCTGCACAAGAAGAAAAGAGGCAGAAAAATGAGAGA
ATG
GCTCAGCATCAGAAACATGAGAATCAAATGCGAGATCTTCAGTTGCAGTGTGAAGCCAATGTCCGCG
AA
CTGCATCAGCTGCAGAATGAAAAATGCCACTTGTTGGTTGAGCATGAGACTCAGAAACTGAAGGAGTT
A
GATGAGGAACATAGCCAAGAATTAAAGGAGTGGAGAGAGAAATTGAGACCTAGGAAAAAGACACTGGAA
GAA
GAGTTTGCCAGGAAACTACAGGAACAGGAAGTATTCTTTAAAATGACTGGGGAGTCTGAATGCCTTA
AC
CCATCAACACAGAGCCGGATTTCCAAATTTTATCCTATTCCCAGCTTGCATTCCACCGGATCATAA


Translation (1235 aa):
MSFFNFRKIFKLGSEKKKKQYEHVKRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE
E
ELEDYMVEIDILASCDHPNIVKLLDAFYYENNLW
ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL
D
ALNYLHDNKIIHRDLKAGNILFTLDGDIKL
ADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR
P
YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR
WSSNFKDFLKKCLEKNVDAR
W
TTSQLLQ
HPFVTVDSNKPIRELIAEAKAEVTEEVEDGKEEDEEEETENSLPIPASKRASSDLSIASSEE
D
KLSQNACILESVSEKTERSNSEDKLNSKILNEKPTTDEPEKAVEDINEHITDAQLEAMTELHDRTAVIK
E
NEREKRPKLENLPDTEDQETVDINSVSEGKENNIMITLETNIEHNLKSEEEKDQEKQQMFENKLIKSEE
I
KDTILQTVDLVSQETGEKEANIQAVDSEVGLTKEDTQEKLGEDDKTQKDVISNTSDVIGTCEAADVAQK
V
DEDSAEDTQSNDGKEVVEVGQKLINKPMVGPEAGGTKEVPIKEIVEMNEIEEGKNKEQAINSSENIMDI
N
EEPGTTEGEEITESSSTEEMEVRSVVADTDQKALGSEVQDASKVTTQIDKEKKEIPVSIKKEPEVTVVS
Q
PTEPQPVLIPSININSDSGENKEEIGSLSKTETILPPESENPKENDNDSGTGSTADTSSIDLNLSISSF
L
SKTKDSGSISLQ
ETRRQKKTLKKTRKFIVDGVEVSVTTSKIVTDSDSKTEELRFLRRQELRELRFLQKE
E
QRAQQQLNSKLQQQREQIFRRFEQEMM
SKKRQYDQEIENLEKQQKQTIERLEQEHTNRLRDEAKRIKGE
Q
EKELSKFQNMLKNRKKE
VINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGSLKKIIQ
Q
QKAELANIERECLNNKQQLMR
AREAAIWELEERHLQEKHQLLKQQLKDQYFMQRHQLLKRHEKETEQMQ
R
YNQRLIEELKNRQTQERARLPKIQRSEAKTRMAMFKKSLRINSTATPDQDRDKIKQ
FAAQEEKRQKNER
M
AQHQKHENQMRDLQLQCEANVRELHQLQ
NEKCHLLVEHETQKLKELDEEHSQELKEWREKLRPRKKTLE
E
EFARKLQEQEVFFKMTGESECLNPSTQSRISKFYPIPSLHSTGS




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser