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Report for CCDS30717.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30717.1 Public Homo sapiens 1 ZYG11B 24 110 108 CCDS HistoryNCBI Gene:79699Re-query CCDS DB by CCDS ID:30717.1Re-query CCDS DB by GeneID:79699See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30717.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000294353.7 ENSP00000294353.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000294353.7Link to Ensembl Protein Viewer:ENSP00000294353.6Re-query CCDS DB by Nucleotide ID:ENST00000294353Re-query CCDS DB by Protein ID:ENSP00000294353
Original member Current member NCBI NM_024646.3 NP_078922.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024646.3Link to Protein Sequence:NP_078922.1Re-query CCDS DB by Nucleotide ID:NM_024646Re-query CCDS DB by Protein ID:NP_078922Link to BLAST:NP_078922.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078922.1 744 Q9C0D3-1 744 100% 0 0

Chromosomal Locations for CCDS 30717.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 52726654 52726683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52756458 52756623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52771020 52771774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52779853 52779993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52784877 52785053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52790003 52790067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52796292 52796391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52796734 52796784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52801819 52801980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52802092 52802139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52813536 52813733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52813860 52813912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52816532 52816629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52821439 52821629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2235 nt):
ATGCCCGAGGACCAGGCCGGCGCAGCCATGGAGGAGGCGTCTCCCTATTCCTTACTTGATATCTGCTTGA
ATTTCTTGACTACTCACCTTGAGAAGTTCTGTTCAGCCAGACAAGATGGAACATTGTGTCTGCAGGAACC
TGGAGTATTCCCACAGGAGGTGGCTGATCGACTGCTTCGGACCATGGCTTTTCATGGTCTATTGAATGAT
GGAACTGTGGGTATTTTTAGGGGCAACCAGATGCGCTTAAAGCGAGCCTGCATTCGCAAAGCAAAGATCT
CTGCTGTTGCTTTCCGGAAAGCTTTCTGCCACCACAAGTTAGTGGAACTTGATGCCACAGGTGTGAATGC
TGATATCACGATTACAGACATTATCAGTGGGCTTGGCAGTAACAAATGGATCCAGCAGAATCTCCAGTGC
CTGGTGCTGAATTCATTAACTCTCTCCCTCGAGGATCCTTACGAGCGCTGCTTCAGCCGGCTTTCTGGCC
TTCGAGCTTTAAGCATCACGAATGTTCTCTTTTACAATGAAGACCTGGCTGAAGTTGCCTCATTGCCAAG
ATTAGAGAGCTTGGATATTTCTAACACCTCAATCACAGACATCACTGCTCTACTGGCCTGCAAAGACCGA
CTCAAGTCTCTAACCATGCACCACTTGAAATGTTTAAAAATGACAACTACCCAGATACTGGATGTAGTTC
GGGAACTCAAACATCTGAATCATCTTGATATCTCAGATGATAAACAGTTTACATCAGACATAGCTCTTCG
CTTACTAGAACAAAAAGACATCCTACCTAACCTTGTTTCTCTGGATGTTTCTGGGAGAAAGCACGTGACA
GATAAAGCCGTTGAAGCCTTTATACAACAACGTCCAAGCATGCAATTTGTAGGTTTGCTGGCTACTGATG
CTGGTTACTCTGAATTCCTCACAGGCGAAGGACATTTGAAGGTGTCTGGGGAAGCCAATGAAACTCAGAT
TGCAGAAGCACTGAAGCGTTACAGTGAACGGGCATTCTTTGTTCGGGAAGCTCTATTTCATCTTTTTAGT
CTGACTCATGTGATGGAAAAAACAAAGCCAGAAATTTTAAAGCTTGTGGTTACTGGGATGAGAAACCACC
CTATGAATTTGCCAGTGCAACTGGCTGCAAGCGCCTGTGTATTTAACTTAACCAAGCAGGATCTTGCTGC
AGGGATGCCTGTCCGACTCCTGGCTGATGTGACCCATTTGCTGCTCAAAGCCATGGAACATTTTCCCAAT
CACCAGCAGTTACAGAAGAATTGCCTCCTTTCACTTTGCAGTGACCGGATCCTTCAAGATGTTCCATTTA
ACAGGTTTGAAGCAGCCAAGCTTGTCATGCAGTGGCTTTGCAACCATGAGGATCAAAACATGCAAAGGAT
GGCAGTTGCTATCATTTCTATCCTGGCTGCCAAGCTTTCTACAGAACAAACTGCACAGCTTGGTACTGAG
CTCTTCATTGTCAGGCAACTTCTTCAAATAGTGAAGCAGAAAACCAATCAAAATTCAGTGGACACTACAT
TGAAATTTACTTTGAGTGCACTTTGGAACCTCACAGATGAATCTCCAACCACTTGTAGACACTTTATTGA
AAACCAAGGGTTAGAACTCTTCATGAGGGTTCTAGAGTCTTTCCCAACTGAGTCATCCATTCAGCAGAAA
GTTCTAGGACTTTTGAACAATATAGCTGAAGTACAAGAATTACATTCTGAATTAATGTGGAAAGATTTTA
TAGACCACATCAGTAGTCTCCTACACAGTGTGGAAGTGGAAGTCAGTTACTTTGCAGCTGGAATTATTGC
CCATTTAATATCCAGAGGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGAT
TTGCATTCAGCTATTTTGAAATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCCAT
TTTTCCCATTACTTGGCTGTTTCACAACACCAGGAGTTCAGCTATGGGCAGTTTGGGCCATGCAACATGT
CTGCAGCAAGAATCCTTCAAGGTATTGCAGCATGCTGATTGAAGAAGGAGGATTGCAGCATTTATACAAC
ATCAAAGATCATGAACATACTGATCCCCATGTCCAACAGATTGCTGTGGCCATTCTGGATAGCTTAGAAA
AACACATTGTGCGCCATGGGAGGCCACCTCCCTGTAAAAAACAGCCCCAAGCCAGACTAAATTGA

Translation (744 aa):
MPEDQAGAAMEEASPYSLLDICLNFLTTHLEKFCSARQDGTLCLQEPGVFPQEVADRLLRTMAFHGLLND
GTVGIFRGNQMRLKRACIRKAKISAVAFRKAFCHHKLVELDATGVNADITITDIISGLGSNKWIQQNLQC
LVLNSLTLSLEDPYERCFSRLSGLRALSITNVLFYNEDLAEVASLPRLESLDISNTSITDITALLACKDR
LKSLTMHHLKCLKMTTTQILDVVRELKHLNHLDISDDKQFTSDIALRLLEQKDILPNLVSLDVSGRKHVT
DKAVEAFIQQRPSMQFVGLLATDAGYSEFLTGEGHLKVSGEANETQIAEALKRYSERAFFVREALFHLFS
LTHVMEKTKPEILKLVVTGMRNHPMNLPVQLAASACVFNLTKQDLAAGMPVRLLADVTHLLLKAMEHFPN
HQQLQKNCLLSLCSDRILQDVPFNRFEAAKLVMQWLCNHEDQNMQRMAVAIISILAAKLSTEQTAQLGTE
LFIVRQLLQIVKQKTNQNSVDTTLKFTLSALWNLTDESPTTCRHFIENQGLELFMRVLESFPTESSIQQK
VLGLLNNIAEVQELHSELMWKDFIDHISSLLHSVEVEVSYFAAGIIAHLISRGEQAWTLSRSQRNSLLDD
LHSAILKWPTPECEMVAYRSFNPFFPLLGCFTTPGVQLWAVWAMQHVCSKNPSRYCSMLIEEGGLQHLYN
IKDHEHTDPHVQQIAVAILDSLEKHIVRHGRPPPCKKQPQARLN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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