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Report for CCDS59303.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59303.1 Public Homo sapiens 17 CENPX 24 110 108 CCDS HistoryNCBI Gene:201254Re-query CCDS DB by CCDS ID:59303.1Re-query CCDS DB by GeneID:201254See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59303.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000392359.8 ENSP00000376168.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000392359.8Link to Ensembl Protein Viewer:ENSP00000376168.3Re-query CCDS DB by Nucleotide ID:ENST00000392359Re-query CCDS DB by Protein ID:ENSP00000376168
Original member Current member NCBI NM_001271006.2 NP_001257935.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001271006.2Link to Protein Sequence:NP_001257935.1Re-query CCDS DB by Nucleotide ID:NM_001271006Re-query CCDS DB by Protein ID:NP_001257935Link to BLAST:NP_001257935.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001257935.1 81 A8MT69-1 81 100% 0 0

Chromosomal Locations for CCDS 59303.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 82019205 82019219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82019293 82019381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82019641 82019694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82019858 82019909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82022826 82022861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (246 nt):
ATGGAGGGAGCAGGAGCTGGATCCGGCTTCCGGAAGGAGCTGGTGAGCAGGCTGCTGCACCTGCACTTCA
AGGATGACAAGACCAAAGTGAGCGGGGACGCGCTGCAGCTCATGGTGGAGTTGCTGAAGGTCTTCGTTGT
GGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGACCAGCTG
GAGAAGGTGCTTCCGCAGCTGCTCCTGGACTTCTAG

Translation (81 aa):
MEGAGAGSGFRKELVSRLLHLHFKDDKTKVSGDALQLMVELLKVFVVEAAVRGVRQAQAEDALRVDVDQL
EKVLPQLLLDF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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