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Report for CCDS43597.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43597.1 Public Homo sapiens 7 TMEM270 24 110 108 CCDS HistoryNCBI Gene:135886Re-query CCDS DB by CCDS ID:43597.1Re-query CCDS DB by GeneID:135886See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43597.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000320531.3 ENSP00000316775.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000320531.3Link to Ensembl Protein Viewer:ENSP00000316775.2Re-query CCDS DB by Nucleotide ID:ENST00000320531Re-query CCDS DB by Protein ID:ENSP00000316775
Original member Current member NCBI NM_182504.4 NP_872310.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182504.4Link to Protein Sequence:NP_872310.2Re-query CCDS DB by Nucleotide ID:NM_182504Re-query CCDS DB by Protein ID:NP_872310Link to BLAST:NP_872310.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_872310.2 265 Q6UE05-1 265 100% 0 0

Chromosomal Locations for CCDS 43597.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 73861195 73861266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73864993 73865421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73865577 73865873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (798 nt):
ATGGAGGCCCTTCCTCCAGTCAGATCCAGCCTTTTGGGGATCCTGTTGCAGGTTACGAGGCTCTCAGTGC
TGTTGGTTCAGAACCGAGATCACCTCTATAATTTCCTGCTCCTCAAGATCAACCTCTTCAACCACTGGGT
GTCAGGGCTGGCCCAGGAGGCCCGGGGGTCCTGTAACTGGCAGGCCCACCTACCCCTGGGAGCTGCAGCC
TGCCCCCTGGGCCAGGCTCTCTGGGCTGGGCTGGCTCTGATACAGGTCCCCGTATGGCTGGTGCTACAGG
GACCCAGGCTGATGTGGGCTGGCATGTGGGGCAGCACCAAGGGCCTGGGCCTGGCCTTGCTCAGTGCCTG
GGAGCAGCTGGGCCTGTCTGTGGCCATCTGGACAGATCTGTTTTTGTCATGTCTGCACGGCCTGATGTTG
GTGGCCTTGCTCTTGGTGGTAGTGACCTGGAGGGTGTGTCAGAAGTCCCACTGCTTCCGACTGGGCAGGC
AGCTCAGTAAGGCCTTGCAAGTGAACTGCGTGGTAAGGAAGCTCCTGGTACAGCTGAGACGTCTGTATTG
GTGGGTGGAGACTATGACTGCCCTCACCTCCTGGCACCTGGCCTATCTCATCACCTGGACCACCTGCCTG
GCCTCCCACCTGCTGCAGGCTGCCTTTGAGCACACGACCCAGCTGGCCGAGGCCCAGGAGGTTGAACCCC
AGGAGGTCTCAGGGTCTTCCTTGCTGCCCTCACTGTCTGCGTCCTCGGACTCAGAGTCTGGAACAGTTTT
GCCAGAGCAAGAAACTCCCAGAGAATAA

Translation (265 aa):
MEALPPVRSSLLGILLQVTRLSVLLVQNRDHLYNFLLLKINLFNHWVSGLAQEARGSCNWQAHLPLGAAA
CPLGQALWAGLALIQVPVWLVLQGPRLMWAGMWGSTKGLGLALLSAWEQLGLSVAIWTDLFLSCLHGLML
VALLLVVVTWRVCQKSHCFRLGRQLSKALQVNCVVRKLLVQLRRLYWWVETMTALTSWHLAYLITWTTCL
ASHLLQAAFEHTTQLAEAQEVEPQEVSGSSLLPSLSASSDSESGTVLPEQETPRE


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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