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Report for CCDS5293.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5293.1 Public Homo sapiens 6 MPC1 24 110 108 CCDS HistoryNCBI Gene:51660Re-query CCDS DB by CCDS ID:5293.1Re-query CCDS DB by GeneID:51660See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5293.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360961.11 ENSP00000354223.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000360961.11Link to Ensembl Protein Viewer:ENSP00000354223.6Re-query CCDS DB by Nucleotide ID:ENST00000360961Re-query CCDS DB by Protein ID:ENSP00000354223
Original member Current member NCBI NM_016098.4 NP_057182.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016098.4Link to Protein Sequence:NP_057182.1Re-query CCDS DB by Nucleotide ID:NM_016098Re-query CCDS DB by Protein ID:NP_057182Link to BLAST:NP_057182.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057182.1 109 Q9Y5U8 109 100% 0 0

Chromosomal Locations for CCDS 5293.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 166365429 166365453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 166365974 166366106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 166366795 166366891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 166370218 166370221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 166382806 166382876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (330 nt):
ATGGCGGGCGCGTTGGTGCGGAAAGCGGCGGACTATGTCCGAAGCAAGGATTTCCGGGACTACCTCATGA
GTACGCACTTCTGGGGCCCAGTAGCCAACTGGGGTCTTCCCATTGCTGCCATCAATGATATGAAAAAGTC
TCCAGAGATTATCAGTGGGCGGATGACATTTGCCCTCTGTTGCTATTCTTTGACATTCATGAGATTTGCC
TACAAGGTACAGCCTCGGAACTGGCTTCTGTTTGCATGCCACGCAACAAATGAAGTAGCCCAGCTCATCC
AGGGAGGGCGGCTTATCAAACACGAGATGACTAAAACGGCATCTGCATAA

Translation (109 aa):
MAGALVRKAADYVRSKDFRDYLMSTHFWGPVANWGLPIAAINDMKKSPEIISGRMTFALCCYSLTFMRFA
YKVQPRNWLLFACHATNEVAQLIQGGRLIKHEMTKTASA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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